Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RAF1P04049 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAF1P04049 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RAF1P04049 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.87■□□□□ 0.77
RAF1P04049 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAF1P04049 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAF1P04049 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.87■□□□□ 0.77
RAF1P04049 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RAF1P04049 AF213884.3-201ENST00000563833 479 ntBASIC19.87■□□□□ 0.77
RAF1P04049 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.87■□□□□ 0.77
RAF1P04049 AL136967.2-201ENST00000623968 743 ntBASIC19.87■□□□□ 0.77
RAF1P04049 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.87■□□□□ 0.77
RAF1P04049 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RAF1P04049 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RAF1P04049 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
RAF1P04049 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.86■□□□□ 0.77
RAF1P04049 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 AC004448.1-201ENST00000458332 883 ntBASIC19.86■□□□□ 0.77
RAF1P04049 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.86■□□□□ 0.77
RAF1P04049 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAF1P04049 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RAF1P04049 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RAF1P04049 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAF1P04049 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
RAF1P04049 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
RAF1P04049 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.85■□□□□ 0.77
RAF1P04049 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.85■□□□□ 0.77
RAF1P04049 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAF1P04049 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAF1P04049 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAF1P04049 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RAF1P04049 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RAF1P04049 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAF1P04049 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAF1P04049 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.84■□□□□ 0.77
RAF1P04049 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.84■□□□□ 0.77
RAF1P04049 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAF1P04049 MIR939-201ENST00000401314 82 ntBASIC19.84■□□□□ 0.77
RAF1P04049 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.84■□□□□ 0.77
RAF1P04049 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.84■□□□□ 0.77
RAF1P04049 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RAF1P04049 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.84■□□□□ 0.77
RAF1P04049 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.84■□□□□ 0.77
RAF1P04049 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.84■□□□□ 0.77
RAF1P04049 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAF1P04049 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAF1P04049 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAF1P04049 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAF1P04049 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAF1P04049 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAF1P04049 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAF1P04049 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAF1P04049 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.83■□□□□ 0.77
RAF1P04049 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RAF1P04049 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAF1P04049 AC091305.1-201ENST00000479476 895 ntBASIC19.83■□□□□ 0.77
RAF1P04049 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.83■□□□□ 0.77
RAF1P04049 AC092171.4-201ENST00000609130 632 ntBASIC19.83■□□□□ 0.77
RAF1P04049 MIR6821-201ENST00000617625 74 ntBASIC19.83■□□□□ 0.77
RAF1P04049 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.83■□□□□ 0.77
RAF1P04049 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RAF1P04049 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAF1P04049 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.83■□□□□ 0.76
RAF1P04049 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAF1P04049 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.83■□□□□ 0.76
RAF1P04049 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAF1P04049 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RAF1P04049 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.83■□□□□ 0.76
RAF1P04049 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAF1P04049 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAF1P04049 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAF1P04049 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAF1P04049 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAF1P04049 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.82■□□□□ 0.76
RAF1P04049 AP001330.3-201ENST00000520123 633 ntBASIC19.82■□□□□ 0.76
RAF1P04049 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAF1P04049 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.82■□□□□ 0.76
RAF1P04049 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RAF1P04049 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAF1P04049 AL022069.1-201ENST00000568025 1636 ntBASIC19.82■□□□□ 0.76
RAF1P04049 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.82■□□□□ 0.76
RAF1P04049 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.82■□□□□ 0.76
RAF1P04049 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.82■□□□□ 0.76
RAF1P04049 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAF1P04049 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAF1P04049 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAF1P04049 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAF1P04049 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAF1P04049 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
RAF1P04049 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RAF1P04049 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 1324.4 ms