Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.59■□□□□ 0.89
OPN1SWP03999 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
OPN1SWP03999 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.59■□□□□ 0.89
OPN1SWP03999 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 AC092053.2-201ENST00000640557 1818 ntBASIC20.59■□□□□ 0.89
OPN1SWP03999 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.59■□□□□ 0.89
OPN1SWP03999 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
OPN1SWP03999 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
OPN1SWP03999 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
OPN1SWP03999 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
OPN1SWP03999 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
OPN1SWP03999 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
OPN1SWP03999 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
OPN1SWP03999 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
OPN1SWP03999 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
OPN1SWP03999 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
OPN1SWP03999 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
OPN1SWP03999 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.57■□□□□ 0.88
OPN1SWP03999 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.57■□□□□ 0.88
OPN1SWP03999 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
OPN1SWP03999 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
OPN1SWP03999 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.57■□□□□ 0.88
OPN1SWP03999 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
OPN1SWP03999 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
OPN1SWP03999 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.57■□□□□ 0.88
OPN1SWP03999 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
OPN1SWP03999 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OPN1SWP03999 AC005703.6-201ENST00000623265 1329 ntBASIC20.56■□□□□ 0.88
OPN1SWP03999 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.56■□□□□ 0.88
OPN1SWP03999 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
OPN1SWP03999 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OPN1SWP03999 C11orf96-202ENST00000528572 1834 ntBASIC20.56■□□□□ 0.88
OPN1SWP03999 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
OPN1SWP03999 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
OPN1SWP03999 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
OPN1SWP03999 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OPN1SWP03999 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.56■□□□□ 0.88
OPN1SWP03999 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OPN1SWP03999 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
OPN1SWP03999 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
OPN1SWP03999 LINC01529-204ENST00000636474 1715 ntBASIC20.56■□□□□ 0.88
OPN1SWP03999 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
OPN1SWP03999 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
OPN1SWP03999 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OPN1SWP03999 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.55■□□□□ 0.88
OPN1SWP03999 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
OPN1SWP03999 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
OPN1SWP03999 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OPN1SWP03999 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OPN1SWP03999 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
OPN1SWP03999 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
OPN1SWP03999 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
OPN1SWP03999 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPN1SWP03999 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPN1SWP03999 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.54■□□□□ 0.88
OPN1SWP03999 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.54■□□□□ 0.88
OPN1SWP03999 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
OPN1SWP03999 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPN1SWP03999 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.54■□□□□ 0.88
OPN1SWP03999 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPN1SWP03999 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.54■□□□□ 0.88
OPN1SWP03999 AC021242.3-201ENST00000607598 1377 ntBASIC20.54■□□□□ 0.88
OPN1SWP03999 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPN1SWP03999 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPN1SWP03999 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
OPN1SWP03999 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
OPN1SWP03999 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OPN1SWP03999 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OPN1SWP03999 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.53■□□□□ 0.88
OPN1SWP03999 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPN1SWP03999 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
OPN1SWP03999 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPN1SWP03999 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.53■□□□□ 0.88
OPN1SWP03999 MIR6722-201ENST00000617286 78 ntBASIC20.53■□□□□ 0.88
OPN1SWP03999 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPN1SWP03999 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPN1SWP03999 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OPN1SWP03999 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.53■□□□□ 0.88
OPN1SWP03999 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
OPN1SWP03999 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
OPN1SWP03999 FBXW4P1-201ENST00000426721 2239 ntBASIC20.52■□□□□ 0.88
OPN1SWP03999 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.52■□□□□ 0.88
OPN1SWP03999 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
OPN1SWP03999 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.52■□□□□ 0.88
OPN1SWP03999 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
OPN1SWP03999 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
OPN1SWP03999 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
OPN1SWP03999 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.52■□□□□ 0.87
OPN1SWP03999 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.52■□□□□ 0.87
OPN1SWP03999 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
OPN1SWP03999 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPN1SWP03999 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
OPN1SWP03999 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms