Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL1A1P02452 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL1A1P02452 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL1A1P02452 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
COL1A1P02452 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL1A1P02452 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.86■■□□□ 1.89
COL1A1P02452 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL1A1P02452 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL1A1P02452 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.86■■□□□ 1.89
COL1A1P02452 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.86■■□□□ 1.89
COL1A1P02452 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.86■■□□□ 1.89
COL1A1P02452 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL1A1P02452 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
COL1A1P02452 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
COL1A1P02452 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL1A1P02452 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL1A1P02452 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL1A1P02452 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL1A1P02452 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
COL1A1P02452 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.85■■□□□ 1.89
COL1A1P02452 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL1A1P02452 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL1A1P02452 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
COL1A1P02452 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL1A1P02452 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL1A1P02452 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.84■■□□□ 1.89
COL1A1P02452 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL1A1P02452 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
COL1A1P02452 AP005435.1-201ENST00000529293 1178 ntBASIC26.84■■□□□ 1.89
COL1A1P02452 CCDC92B-201ENST00000575506 885 ntBASIC26.84■■□□□ 1.89
COL1A1P02452 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL1A1P02452 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
COL1A1P02452 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL1A1P02452 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
COL1A1P02452 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.83■■□□□ 1.89
COL1A1P02452 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
COL1A1P02452 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL1A1P02452 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL1A1P02452 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL1A1P02452 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.83■■□□□ 1.88
COL1A1P02452 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
COL1A1P02452 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.83■■□□□ 1.88
COL1A1P02452 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL1A1P02452 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
COL1A1P02452 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
COL1A1P02452 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL1A1P02452 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL1A1P02452 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.82■■□□□ 1.88
COL1A1P02452 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL1A1P02452 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL1A1P02452 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL1A1P02452 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL1A1P02452 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.81■■□□□ 1.88
COL1A1P02452 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL1A1P02452 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
COL1A1P02452 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.81■■□□□ 1.88
COL1A1P02452 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.81■■□□□ 1.88
COL1A1P02452 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.81■■□□□ 1.88
COL1A1P02452 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.81■■□□□ 1.88
COL1A1P02452 TERF1P2-201ENST00000583350 1212 ntBASIC26.81■■□□□ 1.88
COL1A1P02452 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL1A1P02452 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL1A1P02452 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.8■■□□□ 1.88
COL1A1P02452 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.8■■□□□ 1.88
COL1A1P02452 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL1A1P02452 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL1A1P02452 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.79■■□□□ 1.88
COL1A1P02452 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL1A1P02452 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL1A1P02452 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL1A1P02452 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL1A1P02452 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL1A1P02452 ID1-201ENST00000376105 1233 ntBASIC26.79■■□□□ 1.88
COL1A1P02452 AC004911.1-201ENST00000416316 871 ntBASIC26.79■■□□□ 1.88
COL1A1P02452 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.79■■□□□ 1.88
COL1A1P02452 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.79■■□□□ 1.88
COL1A1P02452 KRT18P14-201ENST00000534205 1250 ntBASIC26.79■■□□□ 1.88
COL1A1P02452 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.79■■□□□ 1.88
COL1A1P02452 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.79■■□□□ 1.88
COL1A1P02452 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.78■■□□□ 1.88
COL1A1P02452 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL1A1P02452 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.78■■□□□ 1.88
COL1A1P02452 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.78■■□□□ 1.88
COL1A1P02452 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.78■■□□□ 1.88
COL1A1P02452 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.78■■□□□ 1.88
COL1A1P02452 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.78■■□□□ 1.88
COL1A1P02452 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.78■■□□□ 1.88
COL1A1P02452 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.78■■□□□ 1.88
COL1A1P02452 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL1A1P02452 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
COL1A1P02452 ANOS2P-203ENST00000472227 1816 ntBASIC26.77■■□□□ 1.88
COL1A1P02452 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.77■■□□□ 1.88
COL1A1P02452 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.77■■□□□ 1.88
COL1A1P02452 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.77■■□□□ 1.88
COL1A1P02452 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.77■■□□□ 1.88
COL1A1P02452 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL1A1P02452 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.77■■□□□ 1.88
COL1A1P02452 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COL1A1P02452 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COL1A1P02452 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms