Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSPG5O95196 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSPG5O95196 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSPG5O95196 AC022211.4-201ENST00000625094 2161 ntBASIC23.71■■□□□ 1.39
CSPG5O95196 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSPG5O95196 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSPG5O95196 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CSPG5O95196 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CSPG5O95196 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.71■■□□□ 1.39
CSPG5O95196 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.71■■□□□ 1.39
CSPG5O95196 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.71■■□□□ 1.39
CSPG5O95196 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CSPG5O95196 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSPG5O95196 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSPG5O95196 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CSPG5O95196 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSPG5O95196 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSPG5O95196 AL355802.2-201ENST00000402069 882 ntBASIC23.7■■□□□ 1.38
CSPG5O95196 CDCA4P2-201ENST00000441182 718 ntBASIC23.7■■□□□ 1.38
CSPG5O95196 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.7■■□□□ 1.38
CSPG5O95196 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSPG5O95196 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSPG5O95196 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSPG5O95196 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.69■■□□□ 1.38
CSPG5O95196 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.69■■□□□ 1.38
CSPG5O95196 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSPG5O95196 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CSPG5O95196 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSPG5O95196 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CSPG5O95196 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.69■■□□□ 1.38
CSPG5O95196 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.69■■□□□ 1.38
CSPG5O95196 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.68■■□□□ 1.38
CSPG5O95196 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSPG5O95196 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSPG5O95196 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSPG5O95196 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.68■■□□□ 1.38
CSPG5O95196 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.68■■□□□ 1.38
CSPG5O95196 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.68■■□□□ 1.38
CSPG5O95196 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSPG5O95196 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.68■■□□□ 1.38
CSPG5O95196 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CSPG5O95196 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSPG5O95196 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.68■■□□□ 1.38
CSPG5O95196 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSPG5O95196 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CSPG5O95196 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.67■■□□□ 1.38
CSPG5O95196 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CSPG5O95196 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
CSPG5O95196 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSPG5O95196 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSPG5O95196 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CSPG5O95196 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSPG5O95196 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSPG5O95196 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSPG5O95196 AC004854.2-201ENST00000608450 1441 ntBASIC23.67■■□□□ 1.38
CSPG5O95196 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSPG5O95196 AC006015.1-201ENST00000429970 570 ntBASIC23.66■■□□□ 1.38
CSPG5O95196 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSPG5O95196 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSPG5O95196 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSPG5O95196 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CSPG5O95196 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.65■■□□□ 1.38
CSPG5O95196 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSPG5O95196 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSPG5O95196 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CSPG5O95196 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSPG5O95196 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSPG5O95196 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.65■■□□□ 1.38
CSPG5O95196 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.65■■□□□ 1.38
CSPG5O95196 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.65■■□□□ 1.38
CSPG5O95196 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSPG5O95196 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CSPG5O95196 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSPG5O95196 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CSPG5O95196 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CSPG5O95196 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CSPG5O95196 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.64■■□□□ 1.38
CSPG5O95196 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.64■■□□□ 1.38
CSPG5O95196 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CSPG5O95196 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CSPG5O95196 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CSPG5O95196 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CSPG5O95196 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
CSPG5O95196 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CSPG5O95196 AC006970.2-201ENST00000450065 779 ntBASIC23.64■■□□□ 1.37
CSPG5O95196 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.64■■□□□ 1.37
CSPG5O95196 DUX4L4-201ENST00000566884 1269 ntBASIC23.64■■□□□ 1.37
CSPG5O95196 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.64■■□□□ 1.37
CSPG5O95196 RAP2CP1-201ENST00000605103 478 ntBASIC23.64■■□□□ 1.37
CSPG5O95196 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.64■■□□□ 1.37
CSPG5O95196 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CSPG5O95196 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CSPG5O95196 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CSPG5O95196 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CSPG5O95196 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSPG5O95196 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CSPG5O95196 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
CSPG5O95196 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSPG5O95196 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSPG5O95196 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms