Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALX3O95076 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALX3O95076 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX3O95076 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.4■□□□□ 0.7
ALX3O95076 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ALX3O95076 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALX3O95076 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ALX3O95076 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
ALX3O95076 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALX3O95076 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.4■□□□□ 0.7
ALX3O95076 THA1P-201ENST00000590384 1145 ntBASIC19.4■□□□□ 0.7
ALX3O95076 BHLHE23-202ENST00000612929 1109 ntBASIC19.4■□□□□ 0.7
ALX3O95076 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALX3O95076 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ALX3O95076 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALX3O95076 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALX3O95076 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALX3O95076 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALX3O95076 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALX3O95076 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ALX3O95076 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX3O95076 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX3O95076 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX3O95076 AC004987.1-201ENST00000428627 508 ntBASIC19.39■□□□□ 0.69
ALX3O95076 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALX3O95076 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ALX3O95076 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
ALX3O95076 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ALX3O95076 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALX3O95076 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.39■□□□□ 0.69
ALX3O95076 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALX3O95076 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX3O95076 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALX3O95076 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALX3O95076 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.38■□□□□ 0.69
ALX3O95076 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.38■□□□□ 0.69
ALX3O95076 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALX3O95076 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ALX3O95076 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALX3O95076 AC007952.6-201ENST00000573168 2673 ntBASIC19.38■□□□□ 0.69
ALX3O95076 PVT1_1.1-201ENST00000615125 194 ntBASIC19.38■□□□□ 0.69
ALX3O95076 AC003957.1-201ENST00000625108 2673 ntBASIC19.38■□□□□ 0.69
ALX3O95076 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ALX3O95076 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX3O95076 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ALX3O95076 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX3O95076 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX3O95076 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX3O95076 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ALX3O95076 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX3O95076 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.37■□□□□ 0.69
ALX3O95076 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.37■□□□□ 0.69
ALX3O95076 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.37■□□□□ 0.69
ALX3O95076 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ALX3O95076 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ALX3O95076 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX3O95076 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX3O95076 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALX3O95076 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX3O95076 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALX3O95076 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.36■□□□□ 0.69
ALX3O95076 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.36■□□□□ 0.69
ALX3O95076 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX3O95076 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX3O95076 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.36■□□□□ 0.69
ALX3O95076 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.36■□□□□ 0.69
ALX3O95076 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALX3O95076 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX3O95076 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALX3O95076 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX3O95076 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX3O95076 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX3O95076 TSPY13P-201ENST00000338964 914 ntBASIC19.35■□□□□ 0.69
ALX3O95076 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ALX3O95076 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.35■□□□□ 0.69
ALX3O95076 MIR4508-201ENST00000584178 70 ntBASIC19.35■□□□□ 0.69
ALX3O95076 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.35■□□□□ 0.69
ALX3O95076 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.35■□□□□ 0.69
ALX3O95076 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.35■□□□□ 0.69
ALX3O95076 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX3O95076 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX3O95076 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX3O95076 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALX3O95076 ESRRAP2-201ENST00000418437 1549 ntBASIC19.35■□□□□ 0.69
ALX3O95076 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALX3O95076 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALX3O95076 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ALX3O95076 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALX3O95076 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.34■□□□□ 0.69
ALX3O95076 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ALX3O95076 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.34■□□□□ 0.69
ALX3O95076 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.34■□□□□ 0.69
ALX3O95076 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALX3O95076 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALX3O95076 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ALX3O95076 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALX3O95076 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALX3O95076 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ALX3O95076 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ALX3O95076 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms