Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BEST1O76090 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
BEST1O76090 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
BEST1O76090 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
BEST1O76090 AC126544.1-201ENST00000580842 1059 ntBASIC23.28■■□□□ 1.32
BEST1O76090 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.28■■□□□ 1.32
BEST1O76090 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
BEST1O76090 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BEST1O76090 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BEST1O76090 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BEST1O76090 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.28■■□□□ 1.32
BEST1O76090 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
BEST1O76090 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.27■■□□□ 1.32
BEST1O76090 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.27■■□□□ 1.32
BEST1O76090 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BEST1O76090 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.27■■□□□ 1.32
BEST1O76090 DUSP8P5-201ENST00000422884 1815 ntBASIC23.27■■□□□ 1.32
BEST1O76090 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BEST1O76090 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.27■■□□□ 1.32
BEST1O76090 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.27■■□□□ 1.32
BEST1O76090 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BEST1O76090 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
BEST1O76090 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
BEST1O76090 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BEST1O76090 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.26■■□□□ 1.31
BEST1O76090 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.26■■□□□ 1.31
BEST1O76090 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.26■■□□□ 1.31
BEST1O76090 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BEST1O76090 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
BEST1O76090 C9orf163-202ENST00000624034 2573 ntBASIC23.26■■□□□ 1.31
BEST1O76090 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
BEST1O76090 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BEST1O76090 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
BEST1O76090 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
BEST1O76090 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
BEST1O76090 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BEST1O76090 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BEST1O76090 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BEST1O76090 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BEST1O76090 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
BEST1O76090 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.24■■□□□ 1.31
BEST1O76090 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BEST1O76090 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.24■■□□□ 1.31
BEST1O76090 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.23■■□□□ 1.31
BEST1O76090 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.23■■□□□ 1.31
BEST1O76090 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.23■■□□□ 1.31
BEST1O76090 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BEST1O76090 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
BEST1O76090 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.23■■□□□ 1.31
BEST1O76090 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
BEST1O76090 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
BEST1O76090 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
BEST1O76090 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
BEST1O76090 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
BEST1O76090 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BEST1O76090 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BEST1O76090 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
BEST1O76090 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.22■■□□□ 1.31
BEST1O76090 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.22■■□□□ 1.31
BEST1O76090 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.22■■□□□ 1.31
BEST1O76090 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.22■■□□□ 1.31
BEST1O76090 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BEST1O76090 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
BEST1O76090 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BEST1O76090 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.22■■□□□ 1.31
BEST1O76090 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.21■■□□□ 1.31
BEST1O76090 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
BEST1O76090 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
BEST1O76090 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.21■■□□□ 1.31
BEST1O76090 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.21■■□□□ 1.31
BEST1O76090 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.21■■□□□ 1.31
BEST1O76090 TSPY26P-201ENST00000476365 1326 ntBASIC23.21■■□□□ 1.31
BEST1O76090 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.21■■□□□ 1.31
BEST1O76090 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.21■■□□□ 1.31
BEST1O76090 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.21■■□□□ 1.31
BEST1O76090 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.21■■□□□ 1.31
BEST1O76090 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
BEST1O76090 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
BEST1O76090 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
BEST1O76090 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
BEST1O76090 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BEST1O76090 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BEST1O76090 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
BEST1O76090 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
BEST1O76090 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.2■■□□□ 1.3
BEST1O76090 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
BEST1O76090 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.2■■□□□ 1.3
BEST1O76090 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.2■■□□□ 1.3
BEST1O76090 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.2■■□□□ 1.3
BEST1O76090 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
BEST1O76090 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms