Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX5O60225 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SSX5O60225 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX5O60225 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.84■□□□□ 0.61
SSX5O60225 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX5O60225 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX5O60225 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSX5O60225 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SSX5O60225 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSX5O60225 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSX5O60225 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SSX5O60225 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSX5O60225 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SSX5O60225 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.83■□□□□ 0.61
SSX5O60225 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.83■□□□□ 0.61
SSX5O60225 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX5O60225 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.83■□□□□ 0.6
SSX5O60225 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.83■□□□□ 0.6
SSX5O60225 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SSX5O60225 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX5O60225 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX5O60225 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX5O60225 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX5O60225 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX5O60225 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX5O60225 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX5O60225 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX5O60225 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX5O60225 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX5O60225 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.82■□□□□ 0.6
SSX5O60225 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.82■□□□□ 0.6
SSX5O60225 AC129492.7-201ENST00000622992 756 ntBASIC18.82■□□□□ 0.6
SSX5O60225 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX5O60225 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.82■□□□□ 0.6
SSX5O60225 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.82■□□□□ 0.6
SSX5O60225 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX5O60225 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SSX5O60225 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX5O60225 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SSX5O60225 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SSX5O60225 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX5O60225 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX5O60225 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.81■□□□□ 0.6
SSX5O60225 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.81■□□□□ 0.6
SSX5O60225 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX5O60225 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX5O60225 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX5O60225 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SSX5O60225 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SSX5O60225 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX5O60225 AC087742.1-201ENST00000575880 1738 ntBASIC18.8■□□□□ 0.6
SSX5O60225 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.8■□□□□ 0.6
SSX5O60225 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX5O60225 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX5O60225 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX5O60225 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX5O60225 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX5O60225 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX5O60225 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SSX5O60225 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX5O60225 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX5O60225 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.79■□□□□ 0.6
SSX5O60225 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.79■□□□□ 0.6
SSX5O60225 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.79■□□□□ 0.6
SSX5O60225 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.79■□□□□ 0.6
SSX5O60225 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.79■□□□□ 0.6
SSX5O60225 U85056.1-201ENST00000616429 682 ntBASIC18.79■□□□□ 0.6
SSX5O60225 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 AF131216.4-201ENST00000638924 1588 ntBASIC18.79■□□□□ 0.6
SSX5O60225 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.79■□□□□ 0.6
SSX5O60225 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX5O60225 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.79■□□□□ 0.6
SSX5O60225 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX5O60225 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.78■□□□□ 0.6
SSX5O60225 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.78■□□□□ 0.6
SSX5O60225 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX5O60225 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX5O60225 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX5O60225 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SSX5O60225 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SSX5O60225 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX5O60225 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SSX5O60225 AC022616.5-201ENST00000518796 181 ntBASIC18.78■□□□□ 0.6
SSX5O60225 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX5O60225 FBXW4P1-201ENST00000426721 2239 ntBASIC18.78■□□□□ 0.6
SSX5O60225 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.78■□□□□ 0.6
SSX5O60225 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX5O60225 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX5O60225 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSX5O60225 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSX5O60225 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.77■□□□□ 0.6
SSX5O60225 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms