Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.4■□□□□ 0.22
SNAI2O43623 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.4■□□□□ 0.22
SNAI2O43623 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.4■□□□□ 0.22
SNAI2O43623 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.4■□□□□ 0.22
SNAI2O43623 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SNAI2O43623 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SNAI2O43623 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.39■□□□□ 0.21
SNAI2O43623 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SNAI2O43623 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SNAI2O43623 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SNAI2O43623 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.39■□□□□ 0.21
SNAI2O43623 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.39■□□□□ 0.21
SNAI2O43623 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 MIR4449-201ENST00000578365 66 ntBASIC16.39■□□□□ 0.21
SNAI2O43623 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
SNAI2O43623 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SNAI2O43623 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNAI2O43623 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.38■□□□□ 0.21
SNAI2O43623 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SNAI2O43623 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
SNAI2O43623 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNAI2O43623 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SNAI2O43623 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SNAI2O43623 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 DUX4L9-201ENST00000449051 1259 ntBASIC16.37■□□□□ 0.21
SNAI2O43623 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SNAI2O43623 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SNAI2O43623 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.37■□□□□ 0.21
SNAI2O43623 RNF126P1-201ENST00000567452 1320 ntBASIC16.37■□□□□ 0.21
SNAI2O43623 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNAI2O43623 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.36■□□□□ 0.21
SNAI2O43623 AC073130.3-201ENST00000624389 2278 ntBASIC16.36■□□□□ 0.21
SNAI2O43623 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNAI2O43623 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SNAI2O43623 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNAI2O43623 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
SNAI2O43623 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.36■□□□□ 0.21
SNAI2O43623 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.36■□□□□ 0.21
SNAI2O43623 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SNAI2O43623 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SNAI2O43623 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.36■□□□□ 0.21
SNAI2O43623 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SNAI2O43623 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNAI2O43623 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNAI2O43623 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNAI2O43623 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNAI2O43623 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SNAI2O43623 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNAI2O43623 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.36■□□□□ 0.21
SNAI2O43623 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNAI2O43623 AC092053.2-201ENST00000640557 1818 ntBASIC16.35■□□□□ 0.21
SNAI2O43623 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNAI2O43623 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
SNAI2O43623 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SNAI2O43623 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.35■□□□□ 0.21
SNAI2O43623 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNAI2O43623 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNAI2O43623 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNAI2O43623 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.35■□□□□ 0.21
SNAI2O43623 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNAI2O43623 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNAI2O43623 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNAI2O43623 AC139530.1-201ENST00000575312 1977 ntBASIC16.35■□□□□ 0.21
SNAI2O43623 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNAI2O43623 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNAI2O43623 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms