Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPM1DO15297 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PPM1DO15297 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PPM1DO15297 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPM1DO15297 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPM1DO15297 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPM1DO15297 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PPM1DO15297 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPM1DO15297 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.51■■□□□ 1.03
PPM1DO15297 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.51■■□□□ 1.03
PPM1DO15297 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.51■■□□□ 1.03
PPM1DO15297 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.51■■□□□ 1.03
PPM1DO15297 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPM1DO15297 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPM1DO15297 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PPM1DO15297 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPM1DO15297 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.51■■□□□ 1.03
PPM1DO15297 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPM1DO15297 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPM1DO15297 MIR572-201ENST00000384983 95 ntBASIC21.5■■□□□ 1.03
PPM1DO15297 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPM1DO15297 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.5■■□□□ 1.03
PPM1DO15297 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPM1DO15297 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PPM1DO15297 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.5■■□□□ 1.03
PPM1DO15297 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.5■■□□□ 1.03
PPM1DO15297 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPM1DO15297 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PPM1DO15297 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PPM1DO15297 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPM1DO15297 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPM1DO15297 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PPM1DO15297 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPM1DO15297 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.49■■□□□ 1.03
PPM1DO15297 AC104564.3-201ENST00000582367 638 ntBASIC21.49■■□□□ 1.03
PPM1DO15297 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.49■■□□□ 1.03
PPM1DO15297 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPM1DO15297 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PPM1DO15297 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPM1DO15297 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPM1DO15297 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PPM1DO15297 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPM1DO15297 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPM1DO15297 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PPM1DO15297 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PPM1DO15297 AL162430.1-201ENST00000480705 870 ntBASIC21.48■■□□□ 1.03
PPM1DO15297 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPM1DO15297 AL353803.4-201ENST00000565882 1934 ntBASIC21.48■■□□□ 1.03
PPM1DO15297 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPM1DO15297 ANOS2P-203ENST00000472227 1816 ntBASIC21.48■■□□□ 1.03
PPM1DO15297 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPM1DO15297 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPM1DO15297 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPM1DO15297 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPM1DO15297 AP005435.1-201ENST00000529293 1178 ntBASIC21.47■■□□□ 1.03
PPM1DO15297 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPM1DO15297 AL358852.1-201ENST00000623174 1268 ntBASIC21.47■■□□□ 1.03
PPM1DO15297 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPM1DO15297 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPM1DO15297 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPM1DO15297 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PPM1DO15297 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPM1DO15297 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPM1DO15297 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPM1DO15297 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.46■■□□□ 1.03
PPM1DO15297 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPM1DO15297 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPM1DO15297 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.46■■□□□ 1.03
PPM1DO15297 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPM1DO15297 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.46■■□□□ 1.03
PPM1DO15297 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PPM1DO15297 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PPM1DO15297 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPM1DO15297 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPM1DO15297 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PPM1DO15297 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.46■■□□□ 1.03
PPM1DO15297 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.45■■□□□ 1.03
PPM1DO15297 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPM1DO15297 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPM1DO15297 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPM1DO15297 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPM1DO15297 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.45■■□□□ 1.02
PPM1DO15297 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.45■■□□□ 1.02
PPM1DO15297 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PPM1DO15297 MIR6084-201ENST00000622012 110 ntBASIC21.45■■□□□ 1.02
PPM1DO15297 AL031602.1-201ENST00000633169 911 ntBASIC21.45■■□□□ 1.02
PPM1DO15297 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPM1DO15297 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPM1DO15297 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.45■■□□□ 1.02
PPM1DO15297 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPM1DO15297 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PPM1DO15297 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PPM1DO15297 AC004687.1-201ENST00000579003 1625 ntBASIC21.44■■□□□ 1.02
PPM1DO15297 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPM1DO15297 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPM1DO15297 YBX1P1-201ENST00000445822 960 ntBASIC21.44■■□□□ 1.02
PPM1DO15297 AC012414.1-201ENST00000556676 535 ntBASIC21.44■■□□□ 1.02
PPM1DO15297 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.44■■□□□ 1.02
PPM1DO15297 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.44■■□□□ 1.02
PPM1DO15297 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms