Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.39■■□□□ 1.17
NPC1O15118 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.39■■□□□ 1.17
NPC1O15118 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.39■■□□□ 1.17
NPC1O15118 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.39■■□□□ 1.17
NPC1O15118 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NPC1O15118 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
NPC1O15118 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPC1O15118 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.38■■□□□ 1.17
NPC1O15118 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPC1O15118 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
NPC1O15118 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPC1O15118 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NPC1O15118 TERF1P2-201ENST00000583350 1212 ntBASIC22.38■■□□□ 1.17
NPC1O15118 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
NPC1O15118 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.38■■□□□ 1.17
NPC1O15118 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.38■■□□□ 1.17
NPC1O15118 AC087239.1-201ENST00000622671 572 ntBASIC22.38■■□□□ 1.17
NPC1O15118 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.38■■□□□ 1.17
NPC1O15118 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPC1O15118 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NPC1O15118 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPC1O15118 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPC1O15118 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPC1O15118 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPC1O15118 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPC1O15118 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPC1O15118 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPC1O15118 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPC1O15118 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPC1O15118 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.37■■□□□ 1.17
NPC1O15118 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.37■■□□□ 1.17
NPC1O15118 CCDC92B-201ENST00000575506 885 ntBASIC22.37■■□□□ 1.17
NPC1O15118 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
NPC1O15118 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.37■■□□□ 1.17
NPC1O15118 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.37■■□□□ 1.17
NPC1O15118 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPC1O15118 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NPC1O15118 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPC1O15118 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPC1O15118 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
NPC1O15118 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPC1O15118 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.36■■□□□ 1.17
NPC1O15118 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.36■■□□□ 1.17
NPC1O15118 AC022517.1-201ENST00000592429 346 ntBASIC22.36■■□□□ 1.17
NPC1O15118 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPC1O15118 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPC1O15118 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPC1O15118 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.35■■□□□ 1.17
NPC1O15118 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPC1O15118 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
NPC1O15118 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.35■■□□□ 1.17
NPC1O15118 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPC1O15118 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
NPC1O15118 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
NPC1O15118 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPC1O15118 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NPC1O15118 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.35■■□□□ 1.17
NPC1O15118 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.35■■□□□ 1.17
NPC1O15118 KRT18P14-201ENST00000534205 1250 ntBASIC22.35■■□□□ 1.17
NPC1O15118 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NPC1O15118 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPC1O15118 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.35■■□□□ 1.17
NPC1O15118 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
NPC1O15118 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
NPC1O15118 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPC1O15118 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.35■■□□□ 1.17
NPC1O15118 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
NPC1O15118 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
NPC1O15118 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
NPC1O15118 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.34■■□□□ 1.17
NPC1O15118 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.34■■□□□ 1.17
NPC1O15118 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NPC1O15118 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.34■■□□□ 1.17
NPC1O15118 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.34■■□□□ 1.17
NPC1O15118 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPC1O15118 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPC1O15118 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
NPC1O15118 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.33■■□□□ 1.17
NPC1O15118 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPC1O15118 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPC1O15118 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPC1O15118 AC004687.1-201ENST00000579003 1625 ntBASIC22.33■■□□□ 1.17
NPC1O15118 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPC1O15118 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPC1O15118 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPC1O15118 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.33■■□□□ 1.17
NPC1O15118 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
NPC1O15118 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPC1O15118 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.33■■□□□ 1.16
NPC1O15118 AL353803.4-201ENST00000565882 1934 ntBASIC22.33■■□□□ 1.16
NPC1O15118 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
NPC1O15118 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
NPC1O15118 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPC1O15118 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
NPC1O15118 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NPC1O15118 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPC1O15118 AL137784.2-201ENST00000607332 1000 ntBASIC22.32■■□□□ 1.16
NPC1O15118 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.32■■□□□ 1.16
NPC1O15118 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPC1O15118 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms