Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC31.3■■■□□ 2.6
CHD2O14647 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.3■■■□□ 2.6
CHD2O14647 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CHD2O14647 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD2O14647 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHD2O14647 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC31.29■■■□□ 2.6
CHD2O14647 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHD2O14647 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHD2O14647 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.29■■■□□ 2.6
CHD2O14647 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.29■■■□□ 2.6
CHD2O14647 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHD2O14647 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.29■■■□□ 2.6
CHD2O14647 CPT2-209ENST00000636935 803 ntTSL 5 BASIC31.29■■■□□ 2.6
CHD2O14647 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.28■■■□□ 2.6
CHD2O14647 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHD2O14647 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31.28■■■□□ 2.6
CHD2O14647 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
CHD2O14647 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHD2O14647 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CHD2O14647 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD2O14647 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD2O14647 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
CHD2O14647 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC31.27■■■□□ 2.6
CHD2O14647 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.27■■■□□ 2.6
CHD2O14647 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31.27■■■□□ 2.6
CHD2O14647 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD2O14647 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD2O14647 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD2O14647 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.27■■■□□ 2.6
CHD2O14647 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CHD2O14647 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.26■■■□□ 2.6
CHD2O14647 TSPY6P-201ENST00000448518 926 ntBASIC31.26■■■□□ 2.6
CHD2O14647 AL121832.2-201ENST00000610979 668 ntBASIC31.26■■■□□ 2.6
CHD2O14647 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC31.26■■■□□ 2.59
CHD2O14647 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.26■■■□□ 2.59
CHD2O14647 DUX4L16-201ENST00000555130 1264 ntBASIC31.26■■■□□ 2.59
CHD2O14647 SMUG1P1-201ENST00000590640 811 ntBASIC31.26■■■□□ 2.59
CHD2O14647 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.26■■■□□ 2.59
CHD2O14647 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
CHD2O14647 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHD2O14647 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHD2O14647 AC069152.1-201ENST00000438030 544 ntBASIC31.25■■■□□ 2.59
CHD2O14647 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.25■■■□□ 2.59
CHD2O14647 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHD2O14647 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHD2O14647 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHD2O14647 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHD2O14647 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHD2O14647 OAS3-207ENST00000551007 998 ntTSL 2 BASIC31.24■■■□□ 2.59
CHD2O14647 AC098934.4-201ENST00000564127 592 ntBASIC31.24■■■□□ 2.59
CHD2O14647 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.24■■■□□ 2.59
CHD2O14647 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC31.24■■■□□ 2.59
CHD2O14647 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.24■■■□□ 2.59
CHD2O14647 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.24■■■□□ 2.59
CHD2O14647 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHD2O14647 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHD2O14647 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHD2O14647 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHD2O14647 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC31.23■■■□□ 2.59
CHD2O14647 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC31.23■■■□□ 2.59
CHD2O14647 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHD2O14647 AL121749.1-202ENST00000609313 2153 ntBASIC31.23■■■□□ 2.59
CHD2O14647 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHD2O14647 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHD2O14647 AC093827.2-201ENST00000512654 315 ntBASIC31.22■■■□□ 2.59
CHD2O14647 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHD2O14647 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHD2O14647 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHD2O14647 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC31.22■■■□□ 2.59
CHD2O14647 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHD2O14647 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHD2O14647 KLF13-207ENST00000560473 489 ntTSL 3 BASIC31.21■■■□□ 2.59
CHD2O14647 AL138781.1-201ENST00000566567 1274 ntBASIC31.21■■■□□ 2.59
CHD2O14647 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHD2O14647 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
CHD2O14647 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHD2O14647 EI24-213ENST00000618552 1747 ntTSL 5 BASIC31.21■■■□□ 2.59
CHD2O14647 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.21■■■□□ 2.59
CHD2O14647 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC31.21■■■□□ 2.59
CHD2O14647 PARP1-210ENST00000629232 477 ntTSL 5 BASIC31.21■■■□□ 2.59
CHD2O14647 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC31.21■■■□□ 2.59
CHD2O14647 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.2■■■□□ 2.59
CHD2O14647 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC31.2■■■□□ 2.59
CHD2O14647 MDK-213ENST00000617138 635 ntTSL 2 BASIC31.2■■■□□ 2.59
CHD2O14647 AC231657.2-201ENST00000624556 255 ntBASIC31.2■■■□□ 2.59
CHD2O14647 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CHD2O14647 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHD2O14647 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CHD2O14647 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.19■■■□□ 2.58
CHD2O14647 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC31.19■■■□□ 2.58
CHD2O14647 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHD2O14647 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CHD2O14647 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
CHD2O14647 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC31.19■■■□□ 2.58
CHD2O14647 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC31.19■■■□□ 2.58
CHD2O14647 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.19■■■□□ 2.58
CHD2O14647 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHD2O14647 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD2O14647 LINC01529-204ENST00000636474 1715 ntBASIC31.18■■■□□ 2.58
CHD2O14647 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms