Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN4O14493 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN4O14493 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN4O14493 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CLDN4O14493 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN4O14493 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CLDN4O14493 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN4O14493 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CLDN4O14493 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN4O14493 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLDN4O14493 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN4O14493 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CLDN4O14493 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN4O14493 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.76■□□□□ 0.91
CLDN4O14493 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
CLDN4O14493 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN4O14493 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLDN4O14493 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN4O14493 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN4O14493 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN4O14493 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN4O14493 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN4O14493 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN4O14493 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN4O14493 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN4O14493 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN4O14493 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLDN4O14493 BX842568.3-201ENST00000418104 571 ntBASIC20.75■□□□□ 0.91
CLDN4O14493 OR2I1P-207ENST00000453522 948 ntBASIC20.75■□□□□ 0.91
CLDN4O14493 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CLDN4O14493 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN4O14493 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN4O14493 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN4O14493 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLDN4O14493 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN4O14493 MIR638-201ENST00000385237 100 ntBASIC20.74■□□□□ 0.91
CLDN4O14493 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN4O14493 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLDN4O14493 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN4O14493 AC005837.3-201ENST00000612163 286 ntBASIC20.74■□□□□ 0.91
CLDN4O14493 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN4O14493 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN4O14493 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN4O14493 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN4O14493 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN4O14493 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN4O14493 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN4O14493 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.73■□□□□ 0.91
CLDN4O14493 AC233992.3-201ENST00000607491 485 ntBASIC20.73■□□□□ 0.91
CLDN4O14493 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN4O14493 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN4O14493 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN4O14493 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN4O14493 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN4O14493 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN4O14493 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
CLDN4O14493 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN4O14493 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN4O14493 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLDN4O14493 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.72■□□□□ 0.91
CLDN4O14493 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN4O14493 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN4O14493 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLDN4O14493 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CLDN4O14493 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLDN4O14493 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN4O14493 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN4O14493 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN4O14493 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN4O14493 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN4O14493 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLDN4O14493 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN4O14493 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN4O14493 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLDN4O14493 AC027682.1-201ENST00000562846 899 ntBASIC20.71■□□□□ 0.91
CLDN4O14493 AC142381.2-201ENST00000566120 298 ntBASIC20.71■□□□□ 0.91
CLDN4O14493 AC008764.7-201ENST00000593779 1081 ntBASIC20.71■□□□□ 0.91
CLDN4O14493 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN4O14493 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLDN4O14493 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN4O14493 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN4O14493 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.71■□□□□ 0.91
CLDN4O14493 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN4O14493 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN4O14493 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN4O14493 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN4O14493 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN4O14493 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN4O14493 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN4O14493 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLDN4O14493 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN4O14493 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN4O14493 AC068587.7-201ENST00000641602 218 ntBASIC20.7■□□□□ 0.9
CLDN4O14493 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN4O14493 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN4O14493 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN4O14493 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN4O14493 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN4O14493 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN4O14493 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms