Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC33A1O00400 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
SLC33A1O00400 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC33A1O00400 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC33A1O00400 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SLC33A1O00400 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC33A1O00400 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC33A1O00400 AC144652.1-201ENST00000609974 1624 ntBASIC18.75■□□□□ 0.59
SLC33A1O00400 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC33A1O00400 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC33A1O00400 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC33A1O00400 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC33A1O00400 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC33A1O00400 MTDHP2-201ENST00000601468 714 ntBASIC18.75■□□□□ 0.59
SLC33A1O00400 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC33A1O00400 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SLC33A1O00400 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SLC33A1O00400 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SLC33A1O00400 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC33A1O00400 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC33A1O00400 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC33A1O00400 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC33A1O00400 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC33A1O00400 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC33A1O00400 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC33A1O00400 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SLC33A1O00400 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC33A1O00400 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
SLC33A1O00400 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC33A1O00400 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC33A1O00400 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC33A1O00400 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC33A1O00400 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC33A1O00400 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC33A1O00400 AC233723.2-201ENST00000623798 2106 ntBASIC18.73■□□□□ 0.59
SLC33A1O00400 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC33A1O00400 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SLC33A1O00400 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC33A1O00400 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC33A1O00400 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC33A1O00400 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC33A1O00400 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC33A1O00400 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC33A1O00400 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC33A1O00400 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC33A1O00400 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC33A1O00400 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
SLC33A1O00400 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC33A1O00400 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC33A1O00400 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC33A1O00400 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC33A1O00400 EP400NL-214ENST00000641289 2402 ntBASIC18.72■□□□□ 0.59
SLC33A1O00400 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC33A1O00400 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC33A1O00400 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC33A1O00400 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC33A1O00400 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC33A1O00400 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC33A1O00400 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC33A1O00400 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC33A1O00400 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC33A1O00400 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC33A1O00400 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC33A1O00400 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC33A1O00400 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC33A1O00400 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC33A1O00400 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC33A1O00400 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC33A1O00400 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC33A1O00400 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC33A1O00400 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC33A1O00400 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC33A1O00400 TSPY9P-201ENST00000440215 945 ntBASIC18.7■□□□□ 0.58
SLC33A1O00400 TSPY11P-201ENST00000442607 1045 ntBASIC18.7■□□□□ 0.58
SLC33A1O00400 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC33A1O00400 AC010997.5-201ENST00000609182 354 ntBASIC18.7■□□□□ 0.58
SLC33A1O00400 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC33A1O00400 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC33A1O00400 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC33A1O00400 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC33A1O00400 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC33A1O00400 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SLC33A1O00400 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC33A1O00400 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC33A1O00400 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC33A1O00400 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC33A1O00400 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC33A1O00400 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC33A1O00400 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC33A1O00400 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC33A1O00400 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC33A1O00400 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC33A1O00400 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC33A1O00400 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC33A1O00400 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC33A1O00400 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC33A1O00400 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC33A1O00400 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC33A1O00400 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC33A1O00400 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms