Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC28A1O00337 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC28A1O00337 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC28A1O00337 AC137767.1-201ENST00000602918 1920 ntBASIC21.24■□□□□ 0.99
SLC28A1O00337 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC28A1O00337 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC28A1O00337 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC28A1O00337 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC28A1O00337 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SLC28A1O00337 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC28A1O00337 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SLC28A1O00337 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC28A1O00337 CLDN5-201ENST00000403084 2357 ntBASIC21.23■□□□□ 0.99
SLC28A1O00337 AC009102.2-201ENST00000606772 1639 ntBASIC21.23■□□□□ 0.99
SLC28A1O00337 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC28A1O00337 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC28A1O00337 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A1O00337 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SLC28A1O00337 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.23■□□□□ 0.99
SLC28A1O00337 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SLC28A1O00337 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A1O00337 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A1O00337 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A1O00337 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A1O00337 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SLC28A1O00337 AC080038.3-201ENST00000623346 1952 ntBASIC21.23■□□□□ 0.99
SLC28A1O00337 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC28A1O00337 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC28A1O00337 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SLC28A1O00337 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.22■□□□□ 0.99
SLC28A1O00337 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
SLC28A1O00337 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.22■□□□□ 0.99
SLC28A1O00337 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC28A1O00337 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SLC28A1O00337 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC28A1O00337 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC28A1O00337 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
SLC28A1O00337 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC28A1O00337 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC28A1O00337 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SLC28A1O00337 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC28A1O00337 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A1O00337 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SLC28A1O00337 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A1O00337 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SLC28A1O00337 AC010997.5-201ENST00000609182 354 ntBASIC21.21■□□□□ 0.99
SLC28A1O00337 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A1O00337 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SLC28A1O00337 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SLC28A1O00337 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A1O00337 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A1O00337 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
SLC28A1O00337 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC28A1O00337 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A1O00337 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A1O00337 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SLC28A1O00337 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A1O00337 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SLC28A1O00337 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A1O00337 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC28A1O00337 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A1O00337 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC28A1O00337 AC239859.2-201ENST00000444165 318 ntBASIC21.2■□□□□ 0.98
SLC28A1O00337 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A1O00337 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A1O00337 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC28A1O00337 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A1O00337 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SLC28A1O00337 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC28A1O00337 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.19■□□□□ 0.98
SLC28A1O00337 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SLC28A1O00337 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 RARRES2P1-201ENST00000474487 481 ntBASIC21.19■□□□□ 0.98
SLC28A1O00337 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 C11orf96-202ENST00000528572 1834 ntBASIC21.19■□□□□ 0.98
SLC28A1O00337 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SLC28A1O00337 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC28A1O00337 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A1O00337 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A1O00337 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A1O00337 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A1O00337 LINC01960-201ENST00000563759 1884 ntBASIC21.18■□□□□ 0.98
SLC28A1O00337 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A1O00337 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.18■□□□□ 0.98
SLC28A1O00337 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SLC28A1O00337 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A1O00337 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SLC28A1O00337 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC28A1O00337 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A1O00337 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC28A1O00337 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms