Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.39■□□□□ 0.54
RNF223E7ERA6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RNF223E7ERA6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF223E7ERA6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF223E7ERA6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF223E7ERA6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF223E7ERA6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF223E7ERA6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF223E7ERA6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF223E7ERA6 AC022211.4-201ENST00000625094 2161 ntBASIC18.38■□□□□ 0.53
RNF223E7ERA6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF223E7ERA6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.38■□□□□ 0.53
RNF223E7ERA6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF223E7ERA6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF223E7ERA6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF223E7ERA6 AL109923.1-201ENST00000618799 583 ntBASIC18.38■□□□□ 0.53
RNF223E7ERA6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 AP003733.4-201ENST00000623785 1697 ntBASIC18.38■□□□□ 0.53
RNF223E7ERA6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF223E7ERA6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF223E7ERA6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF223E7ERA6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF223E7ERA6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF223E7ERA6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF223E7ERA6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF223E7ERA6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF223E7ERA6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF223E7ERA6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF223E7ERA6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.37■□□□□ 0.53
RNF223E7ERA6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF223E7ERA6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF223E7ERA6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF223E7ERA6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF223E7ERA6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF223E7ERA6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF223E7ERA6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF223E7ERA6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF223E7ERA6 KRT19P1-201ENST00000405746 1186 ntBASIC18.36■□□□□ 0.53
RNF223E7ERA6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF223E7ERA6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF223E7ERA6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF223E7ERA6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF223E7ERA6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF223E7ERA6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF223E7ERA6 BX005040.4-201ENST00000637145 1518 ntBASIC18.36■□□□□ 0.53
RNF223E7ERA6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF223E7ERA6 ABHD17AP1-201ENST00000358206 933 ntBASIC18.35■□□□□ 0.53
RNF223E7ERA6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF223E7ERA6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF223E7ERA6 CROCCP5-201ENST00000436658 830 ntBASIC18.35■□□□□ 0.53
RNF223E7ERA6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF223E7ERA6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF223E7ERA6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF223E7ERA6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF223E7ERA6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF223E7ERA6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF223E7ERA6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF223E7ERA6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF223E7ERA6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF223E7ERA6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF223E7ERA6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF223E7ERA6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF223E7ERA6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF223E7ERA6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF223E7ERA6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF223E7ERA6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF223E7ERA6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF223E7ERA6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF223E7ERA6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF223E7ERA6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF223E7ERA6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF223E7ERA6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF223E7ERA6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF223E7ERA6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF223E7ERA6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF223E7ERA6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF223E7ERA6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RNF223E7ERA6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF223E7ERA6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF223E7ERA6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF223E7ERA6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms