Protein–RNA interactions for Protein: B4E1H0

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HB4E1H0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SUPT3HB4E1H0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.68■■□□□ 1.06
SUPT3HB4E1H0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SUPT3HB4E1H0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SUPT3HB4E1H0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.68■■□□□ 1.06
SUPT3HB4E1H0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.68■■□□□ 1.06
SUPT3HB4E1H0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SUPT3HB4E1H0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.68■■□□□ 1.06
SUPT3HB4E1H0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SUPT3HB4E1H0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.68■■□□□ 1.06
SUPT3HB4E1H0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 DUX4L4-201ENST00000566884 1269 ntBASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 AC009086.3-201ENST00000623486 1008 ntBASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HB4E1H0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 LINC00565-201ENST00000562710 2331 ntBASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HB4E1H0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HB4E1H0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SUPT3HB4E1H0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SUPT3HB4E1H0 AC087742.1-201ENST00000575880 1738 ntBASIC21.64■■□□□ 1.06
SUPT3HB4E1H0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
SUPT3HB4E1H0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.64■■□□□ 1.05
SUPT3HB4E1H0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HB4E1H0 UNC93B8-201ENST00000511903 705 ntBASIC21.64■■□□□ 1.05
SUPT3HB4E1H0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HB4E1H0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HB4E1H0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HB4E1H0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SUPT3HB4E1H0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HB4E1H0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HB4E1H0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HB4E1H0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SUPT3HB4E1H0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HB4E1H0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HB4E1H0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.62■■□□□ 1.05
SUPT3HB4E1H0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HB4E1H0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HB4E1H0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SUPT3HB4E1H0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 AC080038.3-201ENST00000623346 1952 ntBASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 C17orf82-201ENST00000623772 1530 ntBASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 MIR6724-1-201ENST00000616420 92 ntBASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 MIR6724-2-201ENST00000616483 92 ntBASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 MIR6724-4-201ENST00000617390 92 ntBASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 MIR6724-3-201ENST00000622482 92 ntBASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HB4E1H0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms