Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CAPN8A6NHC0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CAPN8A6NHC0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.34■■□□□ 1.17
CAPN8A6NHC0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.33■■□□□ 1.17
CAPN8A6NHC0 DUSP8P3-201ENST00000399571 1760 ntBASIC22.33■■□□□ 1.17
CAPN8A6NHC0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.33■■□□□ 1.17
CAPN8A6NHC0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.33■■□□□ 1.17
CAPN8A6NHC0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.33■■□□□ 1.17
CAPN8A6NHC0 UNC93B3-201ENST00000308076 687 ntBASIC22.33■■□□□ 1.17
CAPN8A6NHC0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.33■■□□□ 1.17
CAPN8A6NHC0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CAPN8A6NHC0 MIR3181-201ENST00000578512 73 ntBASIC22.33■■□□□ 1.17
CAPN8A6NHC0 AL499627.2-201ENST00000606283 725 ntBASIC22.33■■□□□ 1.17
CAPN8A6NHC0 AL138724.1-201ENST00000606771 1088 ntBASIC22.33■■□□□ 1.17
CAPN8A6NHC0 pRNA.6-201ENST00000610482 90 ntBASIC22.33■■□□□ 1.17
CAPN8A6NHC0 pRNA.5-201ENST00000612139 90 ntBASIC22.33■■□□□ 1.17
CAPN8A6NHC0 pRNA.11-201ENST00000618423 90 ntBASIC22.33■■□□□ 1.17
CAPN8A6NHC0 pRNA.13-201ENST00000619112 90 ntBASIC22.33■■□□□ 1.17
CAPN8A6NHC0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.33■■□□□ 1.17
CAPN8A6NHC0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CAPN8A6NHC0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CAPN8A6NHC0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 AC026271.2-201ENST00000428091 497 ntBASIC22.32■■□□□ 1.16
CAPN8A6NHC0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
CAPN8A6NHC0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CAPN8A6NHC0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 AL136162.1-201ENST00000607711 1078 ntBASIC22.3■■□□□ 1.16
CAPN8A6NHC0 AC011298.3-201ENST00000615796 283 ntBASIC22.3■■□□□ 1.16
CAPN8A6NHC0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.3■■□□□ 1.16
CAPN8A6NHC0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPN8A6NHC0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPN8A6NHC0 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.29■■□□□ 1.16
CAPN8A6NHC0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.29■■□□□ 1.16
CAPN8A6NHC0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPN8A6NHC0 ZNRF2P3-201ENST00000424200 374 ntBASIC22.29■■□□□ 1.16
CAPN8A6NHC0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.29■■□□□ 1.16
CAPN8A6NHC0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.29■■□□□ 1.16
CAPN8A6NHC0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN8A6NHC0 AC135279.3-201ENST00000610945 1311 ntBASIC22.29■■□□□ 1.16
CAPN8A6NHC0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CAPN8A6NHC0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 AC142381.2-201ENST00000566120 298 ntBASIC22.28■■□□□ 1.16
CAPN8A6NHC0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CAPN8A6NHC0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN8A6NHC0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.27■■□□□ 1.16
CAPN8A6NHC0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.27■■□□□ 1.16
CAPN8A6NHC0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CAPN8A6NHC0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms