Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 AL022069.1-201ENST00000568025 1636 ntBASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV13-2A0A0B4J235 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-2A0A0B4J235 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 AC092667.1-201ENST00000434301 2586 ntBASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-2A0A0B4J235 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 AC079630.1-202ENST00000618127 1840 ntBASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV13-2A0A0B4J235 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV13-2A0A0B4J235 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms