Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 FP325331.1-202ENST00000623531 1380 ntBASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 AC239859.2-201ENST00000444165 318 ntBASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 AC139530.1-201ENST00000575312 1977 ntBASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
TRAV27A0A087WT01 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 TSPY9P-201ENST00000440215 945 ntBASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 TSPY11P-201ENST00000442607 1045 ntBASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 AC009299.2-201ENST00000482477 511 ntBASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 AC009102.2-201ENST00000606772 1639 ntBASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRAV27A0A087WT01 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV27A0A087WT01 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 AL451085.2-201ENST00000605085 799 ntBASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 AC010997.5-201ENST00000609182 354 ntBASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV27A0A087WT01 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
TRAV27A0A087WT01 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV27A0A087WT01 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV27A0A087WT01 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV27A0A087WT01 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV27A0A087WT01 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV27A0A087WT01 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV27A0A087WT01 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV27A0A087WT01 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 AC092053.2-201ENST00000640557 1818 ntBASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 DUX4L4-201ENST00000566884 1269 ntBASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms