Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV18A0A075B6X5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV18A0A075B6X5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV18A0A075B6X5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV18A0A075B6X5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV18A0A075B6X5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV18A0A075B6X5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV18A0A075B6X5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV18A0A075B6X5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV18A0A075B6X5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV18A0A075B6X5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV18A0A075B6X5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.89■□□□□ 0.62
TRAV18A0A075B6X5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV18A0A075B6X5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV18A0A075B6X5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 SLC25A24-204ENST00000569674 2357 ntBASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV18A0A075B6X5 FAM99A-202ENST00000538190 1989 ntBASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 RNF126P1-201ENST00000567452 1320 ntBASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRAV18A0A075B6X5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms