Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV25-1A0A075B6N4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV25-1A0A075B6N4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV25-1A0A075B6N4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.83■□□□□ 0.12
TRBV25-1A0A075B6N4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRBV25-1A0A075B6N4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRBV25-1A0A075B6N4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV25-1A0A075B6N4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV25-1A0A075B6N4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 AC074183.2-201ENST00000623112 922 ntBASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 AC092068.2-201ENST00000590491 1708 ntBASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRBV25-1A0A075B6N4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 ALDH1A3-203ENST00000557963 1670 ntBASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV25-1A0A075B6N4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV25-1A0A075B6N4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV25-1A0A075B6N4 AC131274.2-201ENST00000580697 1507 ntBASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 THA1P-201ENST00000590384 1145 ntBASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRBV25-1A0A075B6N4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV25-1A0A075B6N4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV25-1A0A075B6N4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV25-1A0A075B6N4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms