Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
PDE6BP35913 PABPC1P2-201ENST00000471997 1805 ntBASIC16.08■□□□□ 0.17
PDE6BP35913 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PDE6BP35913 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.08■□□□□ 0.17
PDE6BP35913 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC16.08■□□□□ 0.17
PDE6BP35913 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 AC007326.2-201ENST00000624224 7579 ntBASIC16.08■□□□□ 0.16
PDE6BP35913 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
PDE6BP35913 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC16.08■□□□□ 0.16
PDE6BP35913 AC023157.1-201ENST00000453713 402 ntBASIC16.08■□□□□ 0.16
PDE6BP35913 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PDE6BP35913 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC16.08■□□□□ 0.16
PDE6BP35913 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC16.08■□□□□ 0.16
PDE6BP35913 AC133548.2-202ENST00000562267 148 ntBASIC16.08■□□□□ 0.16
PDE6BP35913 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 AL731555.1-201ENST00000634547 1259 ntBASIC16.08■□□□□ 0.16
PDE6BP35913 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC16.08■□□□□ 0.16
PDE6BP35913 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.08■□□□□ 0.16
PDE6BP35913 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 AC072061.1-201ENST00000569710 2234 ntBASIC16.08■□□□□ 0.16
PDE6BP35913 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PDE6BP35913 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PDE6BP35913 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.08■□□□□ 0.16
PDE6BP35913 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PDE6BP35913 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC16.08■□□□□ 0.16
PDE6BP35913 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDE6BP35913 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PDE6BP35913 RBM22P2-201ENST00000393978 1814 ntBASIC16.08■□□□□ 0.16
PDE6BP35913 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PDE6BP35913 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDE6BP35913 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.07■□□□□ 0.16
PDE6BP35913 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.07■□□□□ 0.16
PDE6BP35913 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDE6BP35913 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 SBF1P1-201ENST00000444527 5631 ntBASIC16.07■□□□□ 0.16
PDE6BP35913 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PDE6BP35913 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC16.07■□□□□ 0.16
PDE6BP35913 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 PARVG-208ENST00000466375 820 ntTSL 2 BASIC16.07■□□□□ 0.16
PDE6BP35913 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC16.07■□□□□ 0.16
PDE6BP35913 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 RN7SL460P-201ENST00000582806 258 ntBASIC16.07■□□□□ 0.16
PDE6BP35913 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC16.07■□□□□ 0.16
PDE6BP35913 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC16.07■□□□□ 0.16
PDE6BP35913 AC010503.4-201ENST00000615487 688 ntBASIC16.07■□□□□ 0.16
PDE6BP35913 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC16.07■□□□□ 0.16
PDE6BP35913 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC16.07■□□□□ 0.16
PDE6BP35913 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC16.07■□□□□ 0.16
PDE6BP35913 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PDE6BP35913 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.07■□□□□ 0.16
PDE6BP35913 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC16.07■□□□□ 0.16
PDE6BP35913 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 AL122018.1-201ENST00000446607 2310 ntBASIC16.07■□□□□ 0.16
PDE6BP35913 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC16.07■□□□□ 0.16
PDE6BP35913 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PDE6BP35913 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 AC010327.5-201ENST00000586923 3061 ntBASIC16.07■□□□□ 0.16
PDE6BP35913 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.07■□□□□ 0.16
PDE6BP35913 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDE6BP35913 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.07■□□□□ 0.16
PDE6BP35913 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms