Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.64■□□□□ 0.74
RIMBP3Q9UFD9 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC19.64■□□□□ 0.74
RIMBP3Q9UFD9 AL358472.2-201ENST00000608236 1418 ntBASIC19.64■□□□□ 0.74
RIMBP3Q9UFD9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 MPI-207ENST00000563422 1481 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 WFDC5-201ENST00000307971 1034 ntTSL 5 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 C9orf116-203ENST00000371791 781 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 KRTAP13-2-201ENST00000399889 867 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 TGFA-203ENST00000418333 1225 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 AC005324.1-201ENST00000434017 746 ntTSL 3 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 VOPP1-211ENST00000453256 649 ntTSL 2 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 CAPNS2-201ENST00000457326 1016 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 BORCS5-203ENST00000542728 580 ntTSL 3 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 CCDC32-204ENST00000558750 814 ntTSL 5 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 TMEM205-204ENST00000586218 593 ntTSL 2 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 RPSAP57-201ENST00000590033 832 ntBASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 GAPDH-211ENST00000619601 1086 ntTSL 5 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 VIPR1-AS1-229ENST00000628282 515 ntTSL 5 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 KRTAP9-1-204ENST00000635603 369 ntTSL 5 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 AC006453.2-203ENST00000637196 774 ntTSL 2 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 HMGCL-204ENST00000436439 1354 ntTSL 2 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.64■□□□□ 0.73
RIMBP3Q9UFD9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 PARK7-202ENST00000377488 783 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 LINC00339-201ENST00000404210 1189 ntBASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 AL135937.1-201ENST00000418690 729 ntTSL 3 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 ERG-209ENST00000429727 1052 ntTSL 5 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 RBMXP2-201ENST00000434705 1168 ntBASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 AL359555.1-201ENST00000437016 806 ntTSL 2 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 LINC01377-201ENST00000505396 649 ntTSL 2 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 AP001372.1-201ENST00000531906 491 ntTSL 4 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 AKAIN1-202ENST00000580650 523 ntTSL 3 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 AC008735.4-201ENST00000614815 608 ntBASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 PCDHB2-205ENST00000625033 519 ntTSL 4 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 LINC00339-213ENST00000642137 222 ntBASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 PCDHB19P-202ENST00000625133 2914 ntBASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RIMBP3Q9UFD9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 PRSS1-201ENST00000311737 800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 ITLN2-201ENST00000368029 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 EXOSC1-202ENST00000370885 718 ntTSL 3 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AC139491.6-201ENST00000513919 735 ntTSL 3 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AC023078.1-201ENST00000524957 952 ntBASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AC007922.2-201ENST00000579049 281 ntTSL 3 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AL138966.1-201ENST00000603212 313 ntBASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 ST7-AS1_2.1-201ENST00000615247 111 ntBASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 MST1P2-201ENST00000457982 2291 ntBASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AC097359.2-201ENST00000604992 2389 ntBASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AF131215.4-201ENST00000526648 1741 ntTSL 5 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 RPP21-223ENST00000436442 522 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 KLF7-209ENST00000458272 539 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 LINC00879-205ENST00000470465 757 ntTSL 2 BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AC021074.1-201ENST00000489462 633 ntBASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 AC090821.1-201ENST00000517380 1041 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIMBP3Q9UFD9 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms