Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MMP13P45452 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
MMP13P45452 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
MMP13P45452 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
MMP13P45452 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
MMP13P45452 AFG3L2P1-201ENST00000521792 1763 ntBASIC13.81□□□□□ -0.2
MMP13P45452 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
MMP13P45452 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
MMP13P45452 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC13.81□□□□□ -0.2
MMP13P45452 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
MMP13P45452 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 SNORD23-201ENST00000408876 110 ntBASIC13.81□□□□□ -0.2
MMP13P45452 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
MMP13P45452 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.81□□□□□ -0.2
MMP13P45452 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC13.81□□□□□ -0.2
MMP13P45452 AC004837.1-201ENST00000446267 564 ntBASIC13.81□□□□□ -0.2
MMP13P45452 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.81□□□□□ -0.2
MMP13P45452 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
MMP13P45452 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 NPM1P43-201ENST00000558669 786 ntBASIC13.81□□□□□ -0.2
MMP13P45452 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.81□□□□□ -0.2
MMP13P45452 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.81□□□□□ -0.2
MMP13P45452 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.81□□□□□ -0.2
MMP13P45452 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.81□□□□□ -0.2
MMP13P45452 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
MMP13P45452 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC13.81□□□□□ -0.2
MMP13P45452 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 AC005154.3-201ENST00000419639 1393 ntBASIC13.81□□□□□ -0.2
MMP13P45452 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MMP13P45452 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
MMP13P45452 MCU-204ENST00000536019 3224 ntTSL 2 BASIC13.81□□□□□ -0.2
MMP13P45452 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
MMP13P45452 AL031587.5-201ENST00000624344 1849 ntBASIC13.8□□□□□ -0.2
MMP13P45452 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
MMP13P45452 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.8□□□□□ -0.2
MMP13P45452 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
MMP13P45452 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC13.8□□□□□ -0.2
MMP13P45452 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC13.8□□□□□ -0.2
MMP13P45452 CFL1P6-201ENST00000400899 494 ntBASIC13.8□□□□□ -0.2
MMP13P45452 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.8□□□□□ -0.2
MMP13P45452 RPL35P9-201ENST00000446059 350 ntBASIC13.8□□□□□ -0.2
MMP13P45452 GNG10P1-201ENST00000452289 199 ntBASIC13.8□□□□□ -0.2
MMP13P45452 AC018463.1-201ENST00000456674 917 ntBASIC13.8□□□□□ -0.2
MMP13P45452 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC13.8□□□□□ -0.2
MMP13P45452 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 AC018635.2-201ENST00000608625 364 ntBASIC13.8□□□□□ -0.2
MMP13P45452 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 MIR6858-201ENST00000620733 67 ntBASIC13.8□□□□□ -0.2
MMP13P45452 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
MMP13P45452 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MMP13P45452 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.8□□□□□ -0.2
MMP13P45452 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.8□□□□□ -0.2
MMP13P45452 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms