Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 GBAP1-208ENST00000566701 1546 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 MIR324-201ENST00000362183 83 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 SNORA50C-201ENST00000408535 133 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 MIR1226-201ENST00000408658 75 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
MTHFRP42898 TEDDM2P-201ENST00000414169 786 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC13.87□□□□□ -0.19
MTHFRP42898 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 TMEM256P1-201ENST00000430550 340 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 AP000343.1-201ENST00000440602 385 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 AC069421.1-201ENST00000447462 323 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 JPT1-205ENST00000470924 663 ntTSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 AC099343.1-201ENST00000513481 609 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC13.87□□□□□ -0.19
MTHFRP42898 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC13.87□□□□□ -0.19
MTHFRP42898 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC13.87□□□□□ -0.19
MTHFRP42898 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 BOLA3P2-201ENST00000586496 323 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 SNORA50.1-201ENST00000628590 135 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 FRG2EP-201ENST00000634243 835 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
MTHFRP42898 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.86□□□□□ -0.19
MTHFRP42898 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MTHFRP42898 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MTHFRP42898 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MTHFRP42898 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
MTHFRP42898 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
MTHFRP42898 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.86□□□□□ -0.19
MTHFRP42898 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MTHFRP42898 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
MTHFRP42898 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
MTHFRP42898 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
MTHFRP42898 AL928654.5-201ENST00000624831 2501 ntBASIC13.86□□□□□ -0.19
MTHFRP42898 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MTHFRP42898 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC13.86□□□□□ -0.19
MTHFRP42898 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MTHFRP42898 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.86□□□□□ -0.19
MTHFRP42898 KLK8-203ENST00000347619 555 ntTSL 2 BASIC13.86□□□□□ -0.19
MTHFRP42898 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC13.86□□□□□ -0.19
MTHFRP42898 SERPINB8P1-201ENST00000401898 377 ntBASIC13.86□□□□□ -0.19
MTHFRP42898 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MTHFRP42898 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC13.86□□□□□ -0.19
MTHFRP42898 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC13.86□□□□□ -0.19
MTHFRP42898 PLAC9P1-203ENST00000440031 223 ntBASIC13.86□□□□□ -0.19
MTHFRP42898 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MTHFRP42898 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC13.86□□□□□ -0.19
MTHFRP42898 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC13.86□□□□□ -0.19
MTHFRP42898 AC008021.1-201ENST00000474180 414 ntBASIC13.86□□□□□ -0.19
MTHFRP42898 PDPN-208ENST00000509009 571 ntTSL 4 BASIC13.86□□□□□ -0.19
MTHFRP42898 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC13.86□□□□□ -0.19
MTHFRP42898 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC13.86□□□□□ -0.19
MTHFRP42898 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MTHFRP42898 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC13.86□□□□□ -0.19
MTHFRP42898 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC13.86□□□□□ -0.19
MTHFRP42898 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
MTHFRP42898 MIR4640-201ENST00000581824 90 ntBASIC13.86□□□□□ -0.19
MTHFRP42898 KRT18P8-201ENST00000581937 1246 ntBASIC13.86□□□□□ -0.19
MTHFRP42898 PPY-202ENST00000587006 431 ntTSL 3 BASIC13.86□□□□□ -0.19
MTHFRP42898 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms