Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.12■□□□□ 0.17
PDE6BP35913 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC16.12■□□□□ 0.17
PDE6BP35913 AC108024.1-201ENST00000626286 1721 ntBASIC16.12■□□□□ 0.17
PDE6BP35913 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC16.12■□□□□ 0.17
PDE6BP35913 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC16.12■□□□□ 0.17
PDE6BP35913 P2RX6P-202ENST00000450626 357 ntBASIC16.12■□□□□ 0.17
PDE6BP35913 AC005011.1-201ENST00000455206 210 ntBASIC16.12■□□□□ 0.17
PDE6BP35913 RN7SL148P-201ENST00000467120 279 ntBASIC16.12■□□□□ 0.17
PDE6BP35913 AC009238.3-201ENST00000512705 217 ntBASIC16.12■□□□□ 0.17
PDE6BP35913 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC16.12■□□□□ 0.17
PDE6BP35913 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC16.12■□□□□ 0.17
PDE6BP35913 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC16.12■□□□□ 0.17
PDE6BP35913 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC16.12■□□□□ 0.17
PDE6BP35913 RN7SL750P-201ENST00000582814 238 ntBASIC16.12■□□□□ 0.17
PDE6BP35913 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC16.12■□□□□ 0.17
PDE6BP35913 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.12■□□□□ 0.17
PDE6BP35913 AC007274.3-201ENST00000619838 385 ntBASIC16.12■□□□□ 0.17
PDE6BP35913 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC16.12■□□□□ 0.17
PDE6BP35913 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.12■□□□□ 0.17
PDE6BP35913 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 AL356583.1-201ENST00000398739 1371 ntBASIC16.12■□□□□ 0.17
PDE6BP35913 AC015959.1-201ENST00000623263 1377 ntBASIC16.12■□□□□ 0.17
PDE6BP35913 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDE6BP35913 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PDE6BP35913 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC16.11■□□□□ 0.17
PDE6BP35913 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC16.11■□□□□ 0.17
PDE6BP35913 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.11■□□□□ 0.17
PDE6BP35913 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PDE6BP35913 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC16.11■□□□□ 0.17
PDE6BP35913 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.11■□□□□ 0.17
PDE6BP35913 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PDE6BP35913 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC16.11■□□□□ 0.17
PDE6BP35913 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC16.11■□□□□ 0.17
PDE6BP35913 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC16.11■□□□□ 0.17
PDE6BP35913 C2orf27AP2-201ENST00000438438 555 ntBASIC16.11■□□□□ 0.17
PDE6BP35913 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC16.11■□□□□ 0.17
PDE6BP35913 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC16.11■□□□□ 0.17
PDE6BP35913 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC16.11■□□□□ 0.17
PDE6BP35913 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC16.11■□□□□ 0.17
PDE6BP35913 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC16.11■□□□□ 0.17
PDE6BP35913 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC16.11■□□□□ 0.17
PDE6BP35913 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 AL160287.1-203ENST00000637960 1061 ntBASIC16.11■□□□□ 0.17
PDE6BP35913 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.11■□□□□ 0.17
PDE6BP35913 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PDE6BP35913 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC16.11■□□□□ 0.17
PDE6BP35913 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 AP000897.1-201ENST00000584036 1613 ntBASIC16.11■□□□□ 0.17
PDE6BP35913 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.11■□□□□ 0.17
PDE6BP35913 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDE6BP35913 YAP1P1-201ENST00000401504 1393 ntBASIC16.11■□□□□ 0.17
PDE6BP35913 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.1■□□□□ 0.17
PDE6BP35913 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PDE6BP35913 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PDE6BP35913 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms