Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.43
PRICKLE4Q2TBC4 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
PRICKLE4Q2TBC4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
PRICKLE4Q2TBC4 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
PRICKLE4Q2TBC4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
PRICKLE4Q2TBC4 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
PRICKLE4Q2TBC4 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
PRICKLE4Q2TBC4 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AL109809.1-201ENST00000418979 1367 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 DDX11L2-201ENST00000437401 1398 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 BCAS2P2-201ENST00000425064 674 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AC010086.2-201ENST00000428616 226 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AQP7P5-201ENST00000428759 1049 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 RPSAP12-201ENST00000435879 888 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AQP7P4-201ENST00000447083 1042 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AQP7P2-201ENST00000453967 1041 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 RN7SL396P-201ENST00000471086 295 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AP005264.6-204ENST00000588436 719 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 CLPP-205ENST00000596605 646 ntTSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AL160191.2-201ENST00000603975 601 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AQP7P3-201ENST00000624547 1041 ntBASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 KC6-207ENST00000600644 2311 ntTSL 3 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.33□□□□□ -0.44
PRICKLE4Q2TBC4 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 MIPEPP1-201ENST00000413533 2027 ntBASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 GEMIN8P4-201ENST00000380526 729 ntBASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 ZNF877P-201ENST00000437614 612 ntBASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 BICD1P1-201ENST00000457832 1222 ntBASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.32□□□□□ -0.44
PRICKLE4Q2TBC4 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms