Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC1A1P43005 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 RPS15P5-201ENST00000449885 432 ntBASIC13.92□□□□□ -0.18
SLC1A1P43005 AC114781.1-201ENST00000450559 1028 ntBASIC13.92□□□□□ -0.18
SLC1A1P43005 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC1A1P43005 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC13.92□□□□□ -0.18
SLC1A1P43005 IGHVII-33-1-201ENST00000524010 280 ntBASIC13.92□□□□□ -0.18
SLC1A1P43005 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC1A1P43005 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A1P43005 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC1A1P43005 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A1P43005 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC1A1P43005 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC1A1P43005 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
SLC1A1P43005 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 PES1-205ENST00000405677 2708 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A1P43005 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SLC1A1P43005 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC1A1P43005 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SLC1A1P43005 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A1P43005 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A1P43005 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A1P43005 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.91□□□□□ -0.18
SLC1A1P43005 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC1A1P43005 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC1A1P43005 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC1A1P43005 AL133499.1-201ENST00000596207 608 ntBASIC13.91□□□□□ -0.18
SLC1A1P43005 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
SLC1A1P43005 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.91□□□□□ -0.18
SLC1A1P43005 AC025262.2-201ENST00000623975 1056 ntBASIC13.91□□□□□ -0.18
SLC1A1P43005 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SLC1A1P43005 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SLC1A1P43005 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC1A1P43005 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.91□□□□□ -0.18
SLC1A1P43005 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC1A1P43005 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC1A1P43005 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SLC1A1P43005 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SLC1A1P43005 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC1A1P43005 AL365181.1-201ENST00000564032 1828 ntBASIC13.9□□□□□ -0.18
SLC1A1P43005 USP14-208ENST00000582707 1803 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC1A1P43005 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC1A1P43005 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms