Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.822e-9■□□□□ 9.6
U2AF2P26368 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)20.09■□□□□ 0.812e-19■□□□□ 9.6
U2AF2P26368 TUFM-204ENST00000569217 814 ntTSL 220.09■□□□□ 0.814e-25■□□□□ 9.6
U2AF2P26368 ZNF598-201ENST00000561787 786 ntTSL 319.67■□□□□ 0.741e-6■□□□□ 9.6
U2AF2P26368 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.744e-8■□□□□ 9.6
U2AF2P26368 KIAA0895L-207ENST00000563918 798 ntTSL 219.59■□□□□ 0.731e-6■□□□□ 9.6
U2AF2P26368 FLNA-215ENST00000474358 696 ntTSL 219.53■□□□□ 0.721e-6■□□□□ 9.6
U2AF2P26368 TUFM-203ENST00000565012 966 ntTSL 519.48■□□□□ 0.714e-25■□□□□ 9.6
U2AF2P26368 CDK5RAP1-214ENST00000488723 708 ntTSL 319.43■□□□□ 0.71e-6■□□□□ 9.6
U2AF2P26368 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.32■□□□□ 0.684e-8■□□□□ 9.6
U2AF2P26368 TCF25-220ENST00000567171 1535 ntTSL 219.08■□□□□ 0.649e-14■□□□□ 9.6
U2AF2P26368 KIAA0895L-203ENST00000561679 2824 ntTSL 218.63■□□□□ 0.571e-6■□□□□ 9.6
U2AF2P26368 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.574e-8■□□□□ 9.6
U2AF2P26368 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)18.51■□□□□ 0.552e-19■□□□□ 9.6
U2AF2P26368 FLNA-209ENST00000444578 843 ntTSL 318.47■□□□□ 0.551e-6■□□□□ 9.6
U2AF2P26368 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.44■□□□□ 0.542e-9■□□□□ 9.6
U2AF2P26368 DST-215ENST00000517840 844 ntTSL 318.37■□□□□ 0.531e-6■□□□□ 9.6
U2AF2P26368 VDAC2-212ENST00000481876 822 ntTSL 318.31■□□□□ 0.522e-9■□□□□ 9.6
U2AF2P26368 PNKP-204ENST00000594661 2111 ntTSL 218.25■□□□□ 0.514e-8■□□□□ 9.6
U2AF2P26368 UPF3A-208ENST00000484246 699 ntTSL 317.97■□□□□ 0.471e-6■□□□□ 9.6
U2AF2P26368 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.464e-8■□□□□ 9.6
U2AF2P26368 SARS2-210ENST00000598598 1022 ntTSL 217.77■□□□□ 0.444e-8■□□□□ 9.6
U2AF2P26368 FLNA-216ENST00000490936 5374 ntTSL 1 (best)17.71■□□□□ 0.431e-6■□□□□ 9.6
U2AF2P26368 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.431e-6■□□□□ 9.6
U2AF2P26368 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.63■□□□□ 0.414e-8■□□□□ 9.6
U2AF2P26368 FLNA-217ENST00000498411 368 ntTSL 317.58■□□□□ 0.41e-6■□□□□ 9.6
U2AF2P26368 NAA60-231ENST00000575754 761 ntTSL 217.55■□□□□ 0.44e-8■□□□□ 9.6
U2AF2P26368 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.43■□□□□ 0.381e-6■□□□□ 9.6
U2AF2P26368 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.384e-8■□□□□ 9.6
U2AF2P26368 ZNF598-209ENST00000567625 775 ntTSL 517.36■□□□□ 0.371e-6■□□□□ 9.6
U2AF2P26368 NAA60-215ENST00000572739 803 ntTSL 417.28■□□□□ 0.364e-8■□□□□ 9.6
U2AF2P26368 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.341e-6■□□□□ 9.6
U2AF2P26368 VDAC2-210ENST00000472137 859 ntTSL 517.17■□□□□ 0.342e-9■□□□□ 9.6
U2AF2P26368 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.12■□□□□ 0.331e-6■□□□□ 9.6
U2AF2P26368 HDDC2-210ENST00000609574 607 ntTSL 217.12■□□□□ 0.331e-6■□□□□ 9.6
U2AF2P26368 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.314e-8■□□□□ 9.6
U2AF2P26368 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.34e-8■□□□□ 9.6
U2AF2P26368 CDK5RAP1-211ENST00000477105 979 ntTSL 516.87■□□□□ 0.291e-6■□□□□ 9.6
U2AF2P26368 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.86■□□□□ 0.291e-6■□□□□ 9.6
U2AF2P26368 VDAC2-204ENST00000344036 681 ntTSL 316.77■□□□□ 0.282e-9■□□□□ 9.6
U2AF2P26368 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.271e-6■□□□□ 9.6
U2AF2P26368 KIAA0895L-212ENST00000570009 680 ntTSL 416.39■□□□□ 0.211e-6■□□□□ 9.6
U2AF2P26368 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.194e-8■□□□□ 9.6
U2AF2P26368 UQCC2-202ENST00000374231 509 ntTSL 316.21■□□□□ 0.191e-6■□□□□ 9.6
U2AF2P26368 PNKP-202ENST00000593706 849 ntTSL 316.2■□□□□ 0.184e-8■□□□□ 9.6
U2AF2P26368 HDDC2-206ENST00000608461 587 ntTSL 216.11■□□□□ 0.171e-6■□□□□ 9.6
U2AF2P26368 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.171e-6■□□□□ 9.6
U2AF2P26368 VDAC2-208ENST00000468285 850 ntTSL 216.04■□□□□ 0.162e-9■□□□□ 9.6
U2AF2P26368 VDAC2-211ENST00000475142 819 ntTSL 316.04■□□□□ 0.162e-9■□□□□ 9.6
U2AF2P26368 SPATA18-204ENST00000505038 588 ntTSL 515.79■□□□□ 0.124e-8■□□□□ 9.6
U2AF2P26368 IGF2BP2-205ENST00000461957 509 ntTSL 515.68■□□□□ 0.14e-8■□□□□ 9.6
U2AF2P26368 DPAGT1-212ENST00000525456 1020 ntTSL 515.62■□□□□ 0.091e-6■□□□□ 9.6
U2AF2P26368 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.094e-8■□□□□ 9.6
U2AF2P26368 VDAC2-213ENST00000498394 804 ntTSL 515.59■□□□□ 0.092e-9■□□□□ 9.6
U2AF2P26368 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.081e-6■□□□□ 9.6
U2AF2P26368 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.54■□□□□ 0.081e-6■□□□□ 9.6
U2AF2P26368 KIAA0895L-205ENST00000563831 836 ntTSL 415.51■□□□□ 0.071e-6■□□□□ 9.6
U2AF2P26368 KIAA0895L-209ENST00000564835 592 ntTSL 1 (best)15.47■□□□□ 0.071e-6■□□□□ 9.6
U2AF2P26368 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC15.32■□□□□ 0.044e-8■□□□□ 9.6
U2AF2P26368 SNF8-206ENST00000509989 677 ntTSL 315.27■□□□□ 0.041e-6■□□□□ 9.6
U2AF2P26368 UQCC2-203ENST00000606961 4365 nt15.1■□□□□ 0.011e-6■□□□□ 9.6
U2AF2P26368 DCAF11-218ENST00000559144 1011 ntTSL 215.1■□□□□ 0.011e-6■□□□□ 9.6
U2AF2P26368 LTB4R-204ENST00000553481 431 ntTSL 214.97□□□□□ -0.011e-6■□□□□ 9.6
U2AF2P26368 SARS2-203ENST00000455102 1118 ntTSL 214.94□□□□□ -0.024e-8■□□□□ 9.6
U2AF2P26368 MCM7-212ENST00000493352 533 ntTSL 214.87□□□□□ -0.036e-11■□□□□ 9.6
U2AF2P26368 DCAF11-212ENST00000558624 2627 ntTSL 214.75□□□□□ -0.051e-6■□□□□ 9.6
U2AF2P26368 FLNA-206ENST00000420627 8225 ntTSL 514.63□□□□□ -0.071e-6■□□□□ 9.6
U2AF2P26368 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.48□□□□□ -0.094e-8■□□□□ 9.6
U2AF2P26368 CDK5RAP1-206ENST00000461356 758 ntTSL 214.43□□□□□ -0.11e-6■□□□□ 9.6
U2AF2P26368 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.11e-6■□□□□ 9.6
U2AF2P26368 PNKP-217ENST00000625216 629 ntTSL 514.24□□□□□ -0.134e-8■□□□□ 9.6
U2AF2P26368 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.141e-6■□□□□ 9.6
U2AF2P26368 DPAGT1-218ENST00000640102 1195 ntTSL 514.19□□□□□ -0.141e-6■□□□□ 9.6
U2AF2P26368 NFATC3-217ENST00000566893 715 ntTSL 214.17□□□□□ -0.141e-6■□□□□ 9.6
U2AF2P26368 NAA60-219ENST00000573345 608 ntTSL 413.71□□□□□ -0.214e-8■□□□□ 9.6
U2AF2P26368 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.221e-6■□□□□ 9.6
U2AF2P26368 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.251e-6■□□□□ 9.6
U2AF2P26368 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC13.3□□□□□ -0.281e-6■□□□□ 9.6
U2AF2P26368 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC13.13□□□□□ -0.314e-8■□□□□ 9.6
U2AF2P26368 ZDHHC16-209ENST00000417044 1325 ntTSL 513.05□□□□□ -0.321e-6■□□□□ 9.6
U2AF2P26368 UPF3A-212ENST00000619079 2423 ntTSL 213.02□□□□□ -0.331e-6■□□□□ 9.6
U2AF2P26368 PGS1-205ENST00000586355 584 ntTSL 412.93□□□□□ -0.341e-6■□□□□ 9.6
U2AF2P26368 NAA60-207ENST00000570551 673 ntTSL 312.9□□□□□ -0.344e-8■□□□□ 9.6
U2AF2P26368 NAA60-224ENST00000574328 552 ntTSL 412.9□□□□□ -0.344e-8■□□□□ 9.6
U2AF2P26368 ZDHHC16-210ENST00000420089 1362 ntTSL 512.6□□□□□ -0.391e-6■□□□□ 9.6
U2AF2P26368 NAA60-212ENST00000572131 558 ntTSL 512.59□□□□□ -0.394e-8■□□□□ 9.6
U2AF2P26368 NAA60-220ENST00000573580 758 ntTSL 4 BASIC12.45□□□□□ -0.424e-8■□□□□ 9.6
U2AF2P26368 ZDHHC16-211ENST00000433086 888 ntTSL 512.24□□□□□ -0.451e-6■□□□□ 9.6
U2AF2P26368 UBE2Z-204ENST00000506498 766 ntTSL 412.22□□□□□ -0.452e-12■□□□□ 9.6
U2AF2P26368 VPS25-206ENST00000591584 667 ntTSL 212.05□□□□□ -0.484e-8■□□□□ 9.6
U2AF2P26368 CNTROB-211ENST00000576536 561 ntTSL 311.78□□□□□ -0.523e-7■□□□□ 9.6
U2AF2P26368 KDM6B-204ENST00000571047 362 ntTSL 511.53□□□□□ -0.564e-8■□□□□ 9.6
U2AF2P26368 NAA60-221ENST00000573593 565 ntTSL 411.51□□□□□ -0.574e-8■□□□□ 9.6
U2AF2P26368 VPS25-202ENST00000589219 914 ntTSL 211.49□□□□□ -0.574e-8■□□□□ 9.6
U2AF2P26368 CASC3-210ENST00000584997 543 ntTSL 311.29□□□□□ -0.66e-7■□□□□ 9.6
U2AF2P26368 VDAC2-206ENST00000447677 738 ntTSL 310.88□□□□□ -0.672e-9■□□□□ 9.6
U2AF2P26368 VPS25-205ENST00000590339 668 ntTSL 210.88□□□□□ -0.674e-8■□□□□ 9.6
U2AF2P26368 PGS1-203ENST00000586019 572 ntTSL 410.68□□□□□ -0.71e-6■□□□□ 9.6
U2AF2P26368 CLASP1-212ENST00000480007 569 ntTSL 410.5□□□□□ -0.731e-6■□□□□ 9.6
U2AF2P26368 ZDHHC16-218ENST00000495735 1632 ntTSL 510.46□□□□□ -0.741e-6■□□□□ 9.6
Retrieved 100 of 36,523 protein–RNA pairs in 328.8 ms