Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 PHBP10-201ENST00000416467 784 ntBASIC14.14□□□□□ -0.15
LMO3Q8TAP4 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 AC015818.1-201ENST00000451011 244 ntBASIC14.14□□□□□ -0.15
LMO3Q8TAP4 PIN4P1-201ENST00000451079 396 ntBASIC14.14□□□□□ -0.15
LMO3Q8TAP4 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 IGLVI-63-201ENST00000524184 384 ntBASIC14.14□□□□□ -0.15
LMO3Q8TAP4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 AC012158.2-201ENST00000536546 354 ntBASIC14.14□□□□□ -0.15
LMO3Q8TAP4 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.14□□□□□ -0.15
LMO3Q8TAP4 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 MDC1-209ENST00000613547 830 ntTSL 5 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 MEP1AP1-201ENST00000636082 1097 ntBASIC14.14□□□□□ -0.15
LMO3Q8TAP4 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LMO3Q8TAP4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 KRT18P46-201ENST00000435568 1279 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 RPL7AP53-201ENST00000468834 793 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 PGAM1P12-201ENST00000505622 748 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 PRDX2P3-201ENST00000515779 586 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 GOLGA2P7-209ENST00000560408 745 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 AP001065.2-201ENST00000617205 644 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 AC026992.2-203ENST00000563004 2419 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 OR10N1P-203ENST00000641736 1305 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.13□□□□□ -0.15
LMO3Q8TAP4 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LMO3Q8TAP4 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LMO3Q8TAP4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms