Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.33□□□□□ -0.12
SSR1P43307 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC14.33□□□□□ -0.12
SSR1P43307 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.33□□□□□ -0.12
SSR1P43307 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.33□□□□□ -0.12
SSR1P43307 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SSR1P43307 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC14.33□□□□□ -0.12
SSR1P43307 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 DKKL1P1-201ENST00000400550 698 ntBASIC14.33□□□□□ -0.12
SSR1P43307 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 IGLV3-15-201ENST00000518356 244 ntBASIC14.33□□□□□ -0.12
SSR1P43307 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.33□□□□□ -0.12
SSR1P43307 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.33□□□□□ -0.12
SSR1P43307 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.33□□□□□ -0.12
SSR1P43307 AC138701.2-201ENST00000553634 226 ntBASIC14.33□□□□□ -0.12
SSR1P43307 AC242376.1-201ENST00000559033 726 ntBASIC14.33□□□□□ -0.12
SSR1P43307 AC012073.1-201ENST00000606114 1108 ntBASIC14.33□□□□□ -0.12
SSR1P43307 MIR6799-201ENST00000620297 69 ntBASIC14.33□□□□□ -0.12
SSR1P43307 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.33□□□□□ -0.12
SSR1P43307 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.33□□□□□ -0.12
SSR1P43307 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 RBM22P2-201ENST00000393978 1814 ntBASIC14.33□□□□□ -0.12
SSR1P43307 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC14.33□□□□□ -0.12
SSR1P43307 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSR1P43307 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
SSR1P43307 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.33□□□□□ -0.12
SSR1P43307 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 AL021155.1-201ENST00000438808 2637 ntBASIC14.32□□□□□ -0.12
SSR1P43307 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.32□□□□□ -0.12
SSR1P43307 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 AC019109.1-201ENST00000401725 1874 ntBASIC14.32□□□□□ -0.12
SSR1P43307 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.32□□□□□ -0.12
SSR1P43307 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SSR1P43307 OR2W2P-201ENST00000406313 909 ntBASIC14.32□□□□□ -0.12
SSR1P43307 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.32□□□□□ -0.12
SSR1P43307 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.32□□□□□ -0.12
SSR1P43307 AL592076.1-201ENST00000424448 303 ntBASIC14.32□□□□□ -0.12
SSR1P43307 CALR4P-201ENST00000431943 946 ntBASIC14.32□□□□□ -0.12
SSR1P43307 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.32□□□□□ -0.12
SSR1P43307 AC244107.1-201ENST00000442033 332 ntBASIC14.32□□□□□ -0.12
SSR1P43307 AC005077.3-201ENST00000449614 213 ntBASIC14.32□□□□□ -0.12
SSR1P43307 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.32□□□□□ -0.12
SSR1P43307 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.32□□□□□ -0.12
SSR1P43307 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.32□□□□□ -0.12
SSR1P43307 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.32□□□□□ -0.12
SSR1P43307 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 AL353770.1-201ENST00000614915 403 ntBASIC14.32□□□□□ -0.12
SSR1P43307 CU633904.3-201ENST00000624042 1029 ntBASIC14.32□□□□□ -0.12
SSR1P43307 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.32□□□□□ -0.12
SSR1P43307 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SSR1P43307 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSR1P43307 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC14.31□□□□□ -0.12
SSR1P43307 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSR1P43307 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms