Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC16.4■□□□□ 0.22
MYCNP04198 MIR3188-201ENST00000583494 85 ntBASIC16.4■□□□□ 0.22
MYCNP04198 AC005838.2-201ENST00000584643 317 ntBASIC16.4■□□□□ 0.22
MYCNP04198 INTS6-AS1-204ENST00000593709 648 ntTSL 5 BASIC16.4■□□□□ 0.22
MYCNP04198 EAF1-AS1-205ENST00000595975 892 ntTSL 2 BASIC16.4■□□□□ 0.22
MYCNP04198 AP000403.1-201ENST00000603349 851 ntBASIC16.4■□□□□ 0.22
MYCNP04198 AL445493.3-201ENST00000619568 477 ntBASIC16.4■□□□□ 0.22
MYCNP04198 AL356266.1-201ENST00000623311 483 ntBASIC16.4■□□□□ 0.22
MYCNP04198 AC119674.1-221ENST00000641594 1213 ntBASIC16.4■□□□□ 0.22
MYCNP04198 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.4■□□□□ 0.22
MYCNP04198 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC16.4■□□□□ 0.22
MYCNP04198 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MYCNP04198 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MYCNP04198 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MYCNP04198 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 AC023024.2-201ENST00000623561 1993 ntBASIC16.39■□□□□ 0.21
MYCNP04198 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MYCNP04198 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 HMGB1P13-201ENST00000406019 642 ntBASIC16.39■□□□□ 0.21
MYCNP04198 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 DHFRP2-201ENST00000414224 547 ntBASIC16.39■□□□□ 0.21
MYCNP04198 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC16.39■□□□□ 0.21
MYCNP04198 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 HNRNPA1P17-201ENST00000496620 924 ntBASIC16.39■□□□□ 0.21
MYCNP04198 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.39■□□□□ 0.21
MYCNP04198 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC16.39■□□□□ 0.21
MYCNP04198 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.39■□□□□ 0.21
MYCNP04198 B2M-202ENST00000544417 933 ntTSL 5 BASIC16.39■□□□□ 0.21
MYCNP04198 AC133569.1-201ENST00000564327 373 ntBASIC16.39■□□□□ 0.21
MYCNP04198 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.39■□□□□ 0.21
MYCNP04198 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC16.39■□□□□ 0.21
MYCNP04198 AC005357.2-202ENST00000590507 1060 ntBASIC16.39■□□□□ 0.21
MYCNP04198 BX088702.1-201ENST00000610784 235 ntBASIC16.39■□□□□ 0.21
MYCNP04198 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MYCNP04198 AK6-205ENST00000618980 483 ntTSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 LINC00431-202ENST00000636375 159 ntBASIC16.39■□□□□ 0.21
MYCNP04198 AC138627.1-201ENST00000641127 1257 ntBASIC16.39■□□□□ 0.21
MYCNP04198 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 CREM-216ENST00000429130 1476 ntTSL 5 BASIC16.39■□□□□ 0.21
MYCNP04198 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.39■□□□□ 0.21
MYCNP04198 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MYCNP04198 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.39■□□□□ 0.21
MYCNP04198 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MYCNP04198 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.39■□□□□ 0.21
MYCNP04198 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MYCNP04198 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC16.38■□□□□ 0.21
MYCNP04198 ASH2LP2-201ENST00000453999 1561 ntBASIC16.38■□□□□ 0.21
MYCNP04198 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.38■□□□□ 0.21
MYCNP04198 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MYCNP04198 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.38■□□□□ 0.21
MYCNP04198 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.38■□□□□ 0.21
MYCNP04198 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.38■□□□□ 0.21
MYCNP04198 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
MYCNP04198 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MYCNP04198 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
MYCNP04198 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MYCNP04198 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.38■□□□□ 0.21
MYCNP04198 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MYCNP04198 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
MYCNP04198 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MYCNP04198 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MYCNP04198 DDX6P2-201ENST00000619520 1455 ntBASIC16.38■□□□□ 0.21
MYCNP04198 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MYCNP04198 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.38■□□□□ 0.21
MYCNP04198 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms