Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 PTPRVP-205ENST00000641549 5067 ntBASIC11.77□□□□□ -0.53
NPIPB4C9JG80 USP14-208ENST00000582707 1803 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 MPV17-204ENST00000399052 749 ntTSL 4 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 AP000244.1-201ENST00000424582 201 ntBASIC11.76□□□□□ -0.53
NPIPB4C9JG80 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 CDK2AP2P2-201ENST00000478512 367 ntBASIC11.76□□□□□ -0.53
NPIPB4C9JG80 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 MIR4649-201ENST00000582839 64 ntBASIC11.76□□□□□ -0.53
NPIPB4C9JG80 TRMT112P6-201ENST00000599234 372 ntBASIC11.76□□□□□ -0.53
NPIPB4C9JG80 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 FRG2EP-201ENST00000634243 835 ntBASIC11.76□□□□□ -0.53
NPIPB4C9JG80 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 MKRN7P-201ENST00000433469 1371 ntBASIC11.76□□□□□ -0.53
NPIPB4C9JG80 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
NPIPB4C9JG80 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NPIPB4C9JG80 AC022080.1-201ENST00000366255 781 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms