Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 ATP6V0CP2-201ENST00000469409 207 ntBASIC10.9□□□□□ -0.66
RAB40CQ96S21 AC119751.2-201ENST00000504529 210 ntBASIC10.9□□□□□ -0.66
RAB40CQ96S21 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 CCNC-217ENST00000523985 958 ntTSL 2 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 MIR4259-201ENST00000584466 101 ntBASIC10.9□□□□□ -0.66
RAB40CQ96S21 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 KLK11-210ENST00000600362 759 ntTSL 3 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 POM121L1P-202ENST00000605258 1835 ntBASIC10.9□□□□□ -0.66
RAB40CQ96S21 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB40CQ96S21 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB40CQ96S21 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
RAB40CQ96S21 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC10.9□□□□□ -0.67
RAB40CQ96S21 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
RAB40CQ96S21 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
RAB40CQ96S21 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RAB40CQ96S21 AC090502.4-201ENST00000551714 1386 ntBASIC10.9□□□□□ -0.67
RAB40CQ96S21 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC10.9□□□□□ -0.67
RAB40CQ96S21 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 JAML-211ENST00000533261 1508 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 AC009108.4-201ENST00000623284 2451 ntBASIC10.89□□□□□ -0.67
RAB40CQ96S21 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 LINC00265-2P-201ENST00000413372 782 ntBASIC10.89□□□□□ -0.67
RAB40CQ96S21 HNRNPA1P33-201ENST00000421426 561 ntBASIC10.89□□□□□ -0.67
RAB40CQ96S21 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 CD164-210ENST00000512821 964 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 RNA5SP412-201ENST00000516234 123 ntBASIC10.89□□□□□ -0.67
RAB40CQ96S21 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 CYGB-203ENST00000589145 788 ntTSL 3 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 PCBP2-OT1-201ENST00000634357 590 ntBASIC10.89□□□□□ -0.67
RAB40CQ96S21 AL033527.4-201ENST00000641026 673 ntBASIC10.89□□□□□ -0.67
RAB40CQ96S21 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB40CQ96S21 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB40CQ96S21 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms