Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 AC133919.3-201ENST00000621407 1804 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 KRT41P-201ENST00000393988 1293 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 AC007322.2-201ENST00000414540 605 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 MTND6P14-201ENST00000433044 522 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 AL645949.2-201ENST00000513434 786 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 ALG1L14P-201ENST00000514230 434 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 AC093367.1-201ENST00000517332 420 ntBASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 PTS-204ENST00000525803 625 ntTSL 3 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 PSME2-213ENST00000560410 755 ntTSL 3 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC19.31■□□□□ 0.68
CDC42BPAQ5VT25 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 AC115284.2-201ENST00000624646 2054 ntBASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 RN7SKP218-201ENST00000410222 292 ntBASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 YBX1P7-201ENST00000436766 535 ntBASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 AC253536.1-201ENST00000437021 315 ntBASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 TPI1P2-201ENST00000491343 752 ntBASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 AC245884.7-201ENST00000514037 356 ntBASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 FAU-206ENST00000529259 1125 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 LINC01551-201ENST00000399387 1581 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42BPAQ5VT25 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 BHLHB9P1-201ENST00000553845 1651 ntBASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 PGC-204ENST00000425343 1152 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 AC104445.1-201ENST00000460597 749 ntTSL 3 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 AC233724.7-201ENST00000511476 253 ntBASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 SNORA74.2-201ENST00000516496 180 ntBASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 AC025278.3-201ENST00000636139 796 ntBASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 AL590556.2-201ENST00000637118 1162 ntTSL 5 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 AC007906.2-202ENST00000619363 1687 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 AC106872.1-201ENST00000512492 1360 ntBASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 COX6B2-209ENST00000590900 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42BPAQ5VT25 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 LINC01044-201ENST00000413637 657 ntTSL 3 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 KRT19P3-201ENST00000507547 828 ntBASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AC106872.8-201ENST00000507651 684 ntBASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 DNM1P17-201ENST00000512082 426 ntBASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 RAD52-212ENST00000541619 560 ntTSL 4 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AC116553.1-201ENST00000561752 397 ntBASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AC027281.2-201ENST00000623856 713 ntBASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 ZC3HC1-203ENST00000360708 1676 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 SNAP25-201ENST00000254976 2053 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms