Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TMBIM4-209ENST00000544599 2240 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 ANKRD18B-201ENST00000290943 3773 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 CSE1L-201ENST00000262982 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 MS4A13-202ENST00000378186 928 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 AL645937.2-201ENST00000396808 931 ntBASIC8.38□□□□□ -1.07
PCP4P48539 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 CHIA-207ENST00000451398 1256 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 RHOD-202ENST00000532559 538 ntTSL 3 BASIC8.38□□□□□ -1.07
PCP4P48539 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC8.38□□□□□ -1.07
PCP4P48539 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 CCDC92B-201ENST00000575506 885 ntBASIC8.38□□□□□ -1.07
PCP4P48539 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 CYP2A7P1-201ENST00000595391 815 ntBASIC8.38□□□□□ -1.07
PCP4P48539 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 AC092171.5-201ENST00000608012 942 ntBASIC8.38□□□□□ -1.07
PCP4P48539 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 TAF1A-203ENST00000366890 1648 ntTSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 FAM153B-211ENST00000510151 1641 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 FAM153A-216ENST00000510276 1641 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 AC018630.6-201ENST00000536668 1618 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 PPP2R2C-202ENST00000335585 4092 ntTSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 AP000533.2-201ENST00000417863 2260 ntBASIC8.38□□□□□ -1.07
PCP4P48539 ITGA6-207ENST00000458358 3261 ntTSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 PTGR2-201ENST00000267568 2559 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 ARHGEF9-213ENST00000624210 1888 ntTSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 ZCCHC6-205ENST00000375960 4939 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 COL12A1-203ENST00000416123 8964 ntTSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 PRAMEF4-201ENST00000235349 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 EDAR-203ENST00000409271 4323 ntTSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 TACC1-204ENST00000518415 3011 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PCP4P48539 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 MBTPS2-202ENST00000379484 4428 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC8.37□□□□□ -1.07
PCP4P48539 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 AC011447.6-201ENST00000623510 2598 ntBASIC8.37□□□□□ -1.07
PCP4P48539 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC8.37□□□□□ -1.07
PCP4P48539 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC8.37□□□□□ -1.07
PCP4P48539 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 PRIMPOL-202ENST00000503752 2168 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
PCP4P48539 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 TCN2-203ENST00000407817 1870 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PCP4P48539 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC8.37□□□□□ -1.07
PCP4P48539 SLC47A1P1-202ENST00000449666 945 ntBASIC8.37□□□□□ -1.07
PCP4P48539 AC113404.2-201ENST00000507884 177 ntBASIC8.37□□□□□ -1.07
PCP4P48539 STK19B-204ENST00000512515 211 ntBASIC8.37□□□□□ -1.07
PCP4P48539 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC8.37□□□□□ -1.07
PCP4P48539 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
PCP4P48539 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC8.37□□□□□ -1.07
PCP4P48539 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PCP4P48539 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
PCP4P48539 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms