Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC37.54■■■■□ 3.6
BIVM-ERCC5R4GMW8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC37.54■■■■□ 3.6
BIVM-ERCC5R4GMW8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC37.54■■■■□ 3.6
BIVM-ERCC5R4GMW8 GXYLT1P2-201ENST00000433312 1230 ntBASIC37.54■■■■□ 3.6
BIVM-ERCC5R4GMW8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC37.54■■■■□ 3.6
BIVM-ERCC5R4GMW8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC37.54■■■■□ 3.6
BIVM-ERCC5R4GMW8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC37.54■■■■□ 3.6
BIVM-ERCC5R4GMW8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
BIVM-ERCC5R4GMW8 LINC01529-204ENST00000636474 1715 ntBASIC37.53■■■■□ 3.6
BIVM-ERCC5R4GMW8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC37.53■■■■□ 3.6
BIVM-ERCC5R4GMW8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC37.53■■■■□ 3.6
BIVM-ERCC5R4GMW8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
BIVM-ERCC5R4GMW8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
BIVM-ERCC5R4GMW8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC37.53■■■■□ 3.6
BIVM-ERCC5R4GMW8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC37.52■■■■□ 3.6
BIVM-ERCC5R4GMW8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC37.52■■■■□ 3.6
BIVM-ERCC5R4GMW8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
BIVM-ERCC5R4GMW8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC37.51■■■■□ 3.6
BIVM-ERCC5R4GMW8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
BIVM-ERCC5R4GMW8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
BIVM-ERCC5R4GMW8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
BIVM-ERCC5R4GMW8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
BIVM-ERCC5R4GMW8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC37.5■■■■□ 3.59
BIVM-ERCC5R4GMW8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
BIVM-ERCC5R4GMW8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
BIVM-ERCC5R4GMW8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
BIVM-ERCC5R4GMW8 AC073111.5-205ENST00000641717 521 ntBASIC37.5■■■■□ 3.59
BIVM-ERCC5R4GMW8 AC079630.1-202ENST00000618127 1840 ntBASIC37.49■■■■□ 3.59
BIVM-ERCC5R4GMW8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC37.49■■■■□ 3.59
BIVM-ERCC5R4GMW8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC37.49■■■■□ 3.59
BIVM-ERCC5R4GMW8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC37.49■■■■□ 3.59
BIVM-ERCC5R4GMW8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC37.49■■■■□ 3.59
BIVM-ERCC5R4GMW8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
BIVM-ERCC5R4GMW8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
BIVM-ERCC5R4GMW8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
BIVM-ERCC5R4GMW8 HLA-L-209ENST00000420110 1011 ntBASIC37.48■■■■□ 3.59
BIVM-ERCC5R4GMW8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC37.48■■■■□ 3.59
BIVM-ERCC5R4GMW8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
BIVM-ERCC5R4GMW8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
BIVM-ERCC5R4GMW8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
BIVM-ERCC5R4GMW8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
BIVM-ERCC5R4GMW8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC37.47■■■■□ 3.59
BIVM-ERCC5R4GMW8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
BIVM-ERCC5R4GMW8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC37.47■■■■□ 3.59
BIVM-ERCC5R4GMW8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC37.47■■■■□ 3.59
BIVM-ERCC5R4GMW8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC37.47■■■■□ 3.59
BIVM-ERCC5R4GMW8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC37.47■■■■□ 3.59
BIVM-ERCC5R4GMW8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
BIVM-ERCC5R4GMW8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC37.46■■■■□ 3.59
BIVM-ERCC5R4GMW8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC37.46■■■■□ 3.59
BIVM-ERCC5R4GMW8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC37.46■■■■□ 3.59
BIVM-ERCC5R4GMW8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC37.46■■■■□ 3.59
BIVM-ERCC5R4GMW8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC37.46■■■■□ 3.59
BIVM-ERCC5R4GMW8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
BIVM-ERCC5R4GMW8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC37.46■■■■□ 3.59
BIVM-ERCC5R4GMW8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC37.45■■■■□ 3.59
BIVM-ERCC5R4GMW8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC37.45■■■■□ 3.59
BIVM-ERCC5R4GMW8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC37.45■■■■□ 3.59
BIVM-ERCC5R4GMW8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC37.45■■■■□ 3.59
BIVM-ERCC5R4GMW8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
BIVM-ERCC5R4GMW8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.58
BIVM-ERCC5R4GMW8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC37.44■■■■□ 3.58
BIVM-ERCC5R4GMW8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
BIVM-ERCC5R4GMW8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC37.43■■■■□ 3.58
BIVM-ERCC5R4GMW8 DBI-210ENST00000542275 757 ntTSL 5 BASIC37.43■■■■□ 3.58
BIVM-ERCC5R4GMW8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC37.43■■■■□ 3.58
BIVM-ERCC5R4GMW8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
BIVM-ERCC5R4GMW8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
BIVM-ERCC5R4GMW8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC37.43■■■■□ 3.58
BIVM-ERCC5R4GMW8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC37.43■■■■□ 3.58
BIVM-ERCC5R4GMW8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC37.43■■■■□ 3.58
BIVM-ERCC5R4GMW8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
BIVM-ERCC5R4GMW8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC37.42■■■■□ 3.58
BIVM-ERCC5R4GMW8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
BIVM-ERCC5R4GMW8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC37.42■■■■□ 3.58
BIVM-ERCC5R4GMW8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC37.42■■■■□ 3.58
BIVM-ERCC5R4GMW8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC37.42■■■■□ 3.58
BIVM-ERCC5R4GMW8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC37.41■■■■□ 3.58
BIVM-ERCC5R4GMW8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC37.41■■■■□ 3.58
BIVM-ERCC5R4GMW8 AP004607.4-201ENST00000530158 1459 ntBASIC37.41■■■■□ 3.58
BIVM-ERCC5R4GMW8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
BIVM-ERCC5R4GMW8 AC004854.2-201ENST00000608450 1441 ntBASIC37.41■■■■□ 3.58
BIVM-ERCC5R4GMW8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
BIVM-ERCC5R4GMW8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC37.4■■■■□ 3.58
BIVM-ERCC5R4GMW8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
BIVM-ERCC5R4GMW8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
BIVM-ERCC5R4GMW8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC37.4■■■■□ 3.58
BIVM-ERCC5R4GMW8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC37.4■■■■□ 3.58
BIVM-ERCC5R4GMW8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC37.4■■■■□ 3.58
BIVM-ERCC5R4GMW8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC37.4■■■■□ 3.58
BIVM-ERCC5R4GMW8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC37.4■■■■□ 3.58
BIVM-ERCC5R4GMW8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
BIVM-ERCC5R4GMW8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
BIVM-ERCC5R4GMW8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
BIVM-ERCC5R4GMW8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC37.39■■■■□ 3.58
BIVM-ERCC5R4GMW8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC37.39■■■■□ 3.58
BIVM-ERCC5R4GMW8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
BIVM-ERCC5R4GMW8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC37.39■■■■□ 3.58
BIVM-ERCC5R4GMW8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC37.39■■■■□ 3.58
BIVM-ERCC5R4GMW8 AC137761.2-201ENST00000561729 223 ntBASIC37.39■■■■□ 3.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms