Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCH2Q9Y6C5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PTCH2Q9Y6C5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PTCH2Q9Y6C5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.32■■□□□ 1.64
PTCH2Q9Y6C5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PTCH2Q9Y6C5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PTCH2Q9Y6C5 TSPY6P-201ENST00000448518 926 ntBASIC25.32■■□□□ 1.64
PTCH2Q9Y6C5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PTCH2Q9Y6C5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PTCH2Q9Y6C5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCH2Q9Y6C5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
PTCH2Q9Y6C5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCH2Q9Y6C5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.31■■□□□ 1.64
PTCH2Q9Y6C5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.31■■□□□ 1.64
PTCH2Q9Y6C5 AC083906.2-201ENST00000511578 360 ntBASIC25.31■■□□□ 1.64
PTCH2Q9Y6C5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCH2Q9Y6C5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCH2Q9Y6C5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCH2Q9Y6C5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PTCH2Q9Y6C5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PTCH2Q9Y6C5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.3■■□□□ 1.64
PTCH2Q9Y6C5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
PTCH2Q9Y6C5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PTCH2Q9Y6C5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
PTCH2Q9Y6C5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.3■■□□□ 1.64
PTCH2Q9Y6C5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 GUSBP6-202ENST00000438529 1198 ntBASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.29■■□□□ 1.64
PTCH2Q9Y6C5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 FAM201B-201ENST00000458407 597 ntBASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 AL138781.1-201ENST00000566567 1274 ntBASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTCH2Q9Y6C5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 MFSD11-216ENST00000590393 1141 ntBASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 AC008687.6-201ENST00000596318 630 ntBASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 BX005040.4-201ENST00000637145 1518 ntBASIC25.27■■□□□ 1.64
PTCH2Q9Y6C5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.26■■□□□ 1.63
PTCH2Q9Y6C5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.26■■□□□ 1.63
PTCH2Q9Y6C5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PTCH2Q9Y6C5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
PTCH2Q9Y6C5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PTCH2Q9Y6C5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.26■■□□□ 1.63
PTCH2Q9Y6C5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
PTCH2Q9Y6C5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PTCH2Q9Y6C5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PTCH2Q9Y6C5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 SLC7A5P2-201ENST00000553010 536 ntBASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PTCH2Q9Y6C5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PTCH2Q9Y6C5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.24■■□□□ 1.63
PTCH2Q9Y6C5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PTCH2Q9Y6C5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.24■■□□□ 1.63
PTCH2Q9Y6C5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.24■■□□□ 1.63
PTCH2Q9Y6C5 DUSP8P4-201ENST00000399538 1761 ntBASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PTCH2Q9Y6C5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms