Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA11Q9Y5H2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA11Q9Y5H2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA11Q9Y5H2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA11Q9Y5H2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA11Q9Y5H2 DUX4L4-201ENST00000566884 1269 ntBASIC21.41■■□□□ 1.02
PCDHGA11Q9Y5H2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PCDHGA11Q9Y5H2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA11Q9Y5H2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA11Q9Y5H2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA11Q9Y5H2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGA11Q9Y5H2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.4■■□□□ 1.02
PCDHGA11Q9Y5H2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA11Q9Y5H2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGA11Q9Y5H2 C17orf82-201ENST00000623772 1530 ntBASIC21.39■■□□□ 1.02
PCDHGA11Q9Y5H2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA11Q9Y5H2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA11Q9Y5H2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
PCDHGA11Q9Y5H2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA11Q9Y5H2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA11Q9Y5H2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA11Q9Y5H2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGA11Q9Y5H2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA11Q9Y5H2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA11Q9Y5H2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA11Q9Y5H2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA11Q9Y5H2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 AL117332.1-201ENST00000622628 974 ntBASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
PCDHGA11Q9Y5H2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 AC009086.3-201ENST00000623486 1008 ntBASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA11Q9Y5H2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 ESRRAP2-201ENST00000418437 1549 ntBASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 AL356740.2-201ENST00000601559 647 ntBASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 LINC00526-201ENST00000581067 1875 ntBASIC21.35■■□□□ 1.01
PCDHGA11Q9Y5H2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms