Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB9Q9Y5E1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 pRNA.6-201ENST00000610482 90 ntBASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 pRNA.5-201ENST00000612139 90 ntBASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 pRNA.11-201ENST00000618423 90 ntBASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 pRNA.13-201ENST00000619112 90 ntBASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
PCDHB9Q9Y5E1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 MIR3181-201ENST00000578512 73 ntBASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB9Q9Y5E1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 AC099791.1-201ENST00000416440 715 ntBASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 AL138724.1-201ENST00000606771 1088 ntBASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PCDHB9Q9Y5E1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB9Q9Y5E1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB9Q9Y5E1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHB9Q9Y5E1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB9Q9Y5E1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHB9Q9Y5E1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHB9Q9Y5E1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB9Q9Y5E1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB9Q9Y5E1 AC011298.3-201ENST00000615796 283 ntBASIC22.44■■□□□ 1.18
PCDHB9Q9Y5E1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB9Q9Y5E1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB9Q9Y5E1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.43■■□□□ 1.18
PCDHB9Q9Y5E1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 AC090192.1-201ENST00000517740 490 ntBASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 AL499627.2-201ENST00000606283 725 ntBASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDHB9Q9Y5E1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHB9Q9Y5E1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 DUSP8P3-201ENST00000399571 1760 ntBASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 RARRES2P11-201ENST00000635158 484 ntBASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB9Q9Y5E1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms