Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 RPS2P35-201ENST00000443417 897 ntBASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 AC079630.1-202ENST00000618127 1840 ntBASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM5Q9Y4Y9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
LSM5Q9Y4Y9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
LSM5Q9Y4Y9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
LSM5Q9Y4Y9 AC080038.3-201ENST00000623346 1952 ntBASIC18.21■□□□□ 0.5
LSM5Q9Y4Y9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM5Q9Y4Y9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 AC007029.1-201ENST00000604183 313 ntBASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 RAP2CP1-202ENST00000605179 643 ntBASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 AC026310.3-201ENST00000625186 2373 ntBASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM5Q9Y4Y9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 AC026202.3-201ENST00000600805 1127 ntBASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 AC016575.1-201ENST00000607026 382 ntBASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.18■□□□□ 0.5
LSM5Q9Y4Y9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM5Q9Y4Y9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LSM5Q9Y4Y9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM5Q9Y4Y9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM5Q9Y4Y9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM5Q9Y4Y9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.16■□□□□ 0.5
LSM5Q9Y4Y9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.16■□□□□ 0.5
LSM5Q9Y4Y9 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.16■□□□□ 0.5
LSM5Q9Y4Y9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.16■□□□□ 0.5
LSM5Q9Y4Y9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms