Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EXOSC1Q9Y3B2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EXOSC1Q9Y3B2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EXOSC1Q9Y3B2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
EXOSC1Q9Y3B2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EXOSC1Q9Y3B2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
EXOSC1Q9Y3B2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 AC022616.5-201ENST00000518796 181 ntBASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EXOSC1Q9Y3B2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EXOSC1Q9Y3B2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXOSC1Q9Y3B2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
EXOSC1Q9Y3B2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
EXOSC1Q9Y3B2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 RNF126P1-201ENST00000567452 1320 ntBASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.76■□□□□ 0.75
EXOSC1Q9Y3B2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 AC026310.3-201ENST00000625186 2373 ntBASIC19.75■□□□□ 0.75
EXOSC1Q9Y3B2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EXOSC1Q9Y3B2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EXOSC1Q9Y3B2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EXOSC1Q9Y3B2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.74■□□□□ 0.75
EXOSC1Q9Y3B2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.74■□□□□ 0.75
EXOSC1Q9Y3B2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EXOSC1Q9Y3B2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
EXOSC1Q9Y3B2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 AC004448.1-201ENST00000458332 883 ntBASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 AC144652.1-201ENST00000609974 1624 ntBASIC19.73■□□□□ 0.75
EXOSC1Q9Y3B2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 MIR4449-201ENST00000578365 66 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms