Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 AC024257.2-201ENST00000549699 147 ntBASIC19.01■□□□□ 0.63
TREM2Q9NZC2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 AC142381.2-201ENST00000566120 298 ntBASIC19.01■□□□□ 0.63
TREM2Q9NZC2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TREM2Q9NZC2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19■□□□□ 0.63
TREM2Q9NZC2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TREM2Q9NZC2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19■□□□□ 0.63
TREM2Q9NZC2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19■□□□□ 0.63
TREM2Q9NZC2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TREM2Q9NZC2 AC006455.2-201ENST00000429931 906 ntBASIC19■□□□□ 0.63
TREM2Q9NZC2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19■□□□□ 0.63
TREM2Q9NZC2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19■□□□□ 0.63
TREM2Q9NZC2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TREM2Q9NZC2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19■□□□□ 0.63
TREM2Q9NZC2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TREM2Q9NZC2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 SYT6-210ENST00000641643 1587 ntBASIC18.99■□□□□ 0.63
TREM2Q9NZC2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TREM2Q9NZC2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREM2Q9NZC2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 DUX4L19-201ENST00000557448 1267 ntBASIC18.97■□□□□ 0.63
TREM2Q9NZC2 AC009086.3-201ENST00000623486 1008 ntBASIC18.97■□□□□ 0.63
TREM2Q9NZC2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.97■□□□□ 0.63
TREM2Q9NZC2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 SERBP1P1-201ENST00000396021 1160 ntBASIC18.96■□□□□ 0.63
TREM2Q9NZC2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.96■□□□□ 0.63
TREM2Q9NZC2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREM2Q9NZC2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 AC092171.4-201ENST00000609130 632 ntBASIC18.95■□□□□ 0.62
TREM2Q9NZC2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms