Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALYQ9NYX4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CALYQ9NYX4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALYQ9NYX4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALYQ9NYX4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CALYQ9NYX4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALYQ9NYX4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CALYQ9NYX4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.28■□□□□ 0.52
CALYQ9NYX4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.28■□□□□ 0.52
CALYQ9NYX4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CALYQ9NYX4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CALYQ9NYX4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CALYQ9NYX4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CALYQ9NYX4 AC241377.3-202ENST00000626088 1088 ntBASIC18.28■□□□□ 0.52
CALYQ9NYX4 AC241585.3-202ENST00000628937 1088 ntBASIC18.28■□□□□ 0.52
CALYQ9NYX4 AC245100.8-202ENST00000629247 1058 ntBASIC18.28■□□□□ 0.52
CALYQ9NYX4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.28■□□□□ 0.52
CALYQ9NYX4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CALYQ9NYX4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 ESRRAP2-201ENST00000418437 1549 ntBASIC18.28■□□□□ 0.52
CALYQ9NYX4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALYQ9NYX4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALYQ9NYX4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CALYQ9NYX4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALYQ9NYX4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALYQ9NYX4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CALYQ9NYX4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALYQ9NYX4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALYQ9NYX4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CALYQ9NYX4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.27■□□□□ 0.52
CALYQ9NYX4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CALYQ9NYX4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.27■□□□□ 0.52
CALYQ9NYX4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CALYQ9NYX4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.27■□□□□ 0.51
CALYQ9NYX4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.27■□□□□ 0.51
CALYQ9NYX4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CALYQ9NYX4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CALYQ9NYX4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CALYQ9NYX4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CALYQ9NYX4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CALYQ9NYX4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.26■□□□□ 0.51
CALYQ9NYX4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALYQ9NYX4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.26■□□□□ 0.51
CALYQ9NYX4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.26■□□□□ 0.51
CALYQ9NYX4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALYQ9NYX4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALYQ9NYX4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CALYQ9NYX4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CALYQ9NYX4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.26■□□□□ 0.51
CALYQ9NYX4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.25■□□□□ 0.51
CALYQ9NYX4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.25■□□□□ 0.51
CALYQ9NYX4 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.25■□□□□ 0.51
CALYQ9NYX4 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.25■□□□□ 0.51
CALYQ9NYX4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.25■□□□□ 0.51
CALYQ9NYX4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 AL117328.2-201ENST00000624617 1940 ntBASIC18.25■□□□□ 0.51
CALYQ9NYX4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALYQ9NYX4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALYQ9NYX4 AC004687.1-201ENST00000579003 1625 ntBASIC18.24■□□□□ 0.51
CALYQ9NYX4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.24■□□□□ 0.51
CALYQ9NYX4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALYQ9NYX4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CALYQ9NYX4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALYQ9NYX4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALYQ9NYX4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.23■□□□□ 0.51
CALYQ9NYX4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms