Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.4■■□□□ 1.02
CUEDC1Q9NWM3 MIR5787-201ENST00000611784 55 ntBASIC21.4■■□□□ 1.02
CUEDC1Q9NWM3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.4■■□□□ 1.02
CUEDC1Q9NWM3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CUEDC1Q9NWM3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CUEDC1Q9NWM3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CUEDC1Q9NWM3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CUEDC1Q9NWM3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CUEDC1Q9NWM3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CUEDC1Q9NWM3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 SERBP1P1-201ENST00000396021 1160 ntBASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CUEDC1Q9NWM3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 ZNRF2P3-201ENST00000424200 374 ntBASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 MIR3181-201ENST00000578512 73 ntBASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 AC092171.4-201ENST00000609130 632 ntBASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 SYT6-210ENST00000641643 1587 ntBASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CUEDC1Q9NWM3 AL499627.2-201ENST00000606283 725 ntBASIC21.37■■□□□ 1.01
CUEDC1Q9NWM3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CUEDC1Q9NWM3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.37■■□□□ 1.01
CUEDC1Q9NWM3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.37■■□□□ 1.01
CUEDC1Q9NWM3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CUEDC1Q9NWM3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.37■■□□□ 1.01
CUEDC1Q9NWM3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CUEDC1Q9NWM3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 AC026271.2-201ENST00000428091 497 ntBASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CUEDC1Q9NWM3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 UNC93B3-201ENST00000308076 687 ntBASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 AC142381.2-201ENST00000566120 298 ntBASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CUEDC1Q9NWM3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 AC004687.1-201ENST00000579003 1625 ntBASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 DUX4L19-201ENST00000557448 1267 ntBASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 AC106739.1-201ENST00000617035 715 ntBASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CUEDC1Q9NWM3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CUEDC1Q9NWM3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.33■■□□□ 1.01
CUEDC1Q9NWM3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CUEDC1Q9NWM3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.33■■□□□ 1.01
CUEDC1Q9NWM3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CUEDC1Q9NWM3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CUEDC1Q9NWM3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CUEDC1Q9NWM3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
CUEDC1Q9NWM3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.33■■□□□ 1
CUEDC1Q9NWM3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.33■■□□□ 1
CUEDC1Q9NWM3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.33■■□□□ 1
CUEDC1Q9NWM3 AC133637.1-201ENST00000624115 1537 ntBASIC21.33■■□□□ 1
CUEDC1Q9NWM3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CUEDC1Q9NWM3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CUEDC1Q9NWM3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CUEDC1Q9NWM3 AC135279.3-201ENST00000610945 1311 ntBASIC21.32■■□□□ 1
CUEDC1Q9NWM3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.32■■□□□ 1
CUEDC1Q9NWM3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CUEDC1Q9NWM3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CUEDC1Q9NWM3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CUEDC1Q9NWM3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.32■■□□□ 1
CUEDC1Q9NWM3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CUEDC1Q9NWM3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms