Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AC073130.3-201ENST00000624389 2278 ntBASIC19.08■□□□□ 0.65
C12orf4Q9NQ89 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
C12orf4Q9NQ89 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C12orf4Q9NQ89 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 AC233723.2-201ENST00000623798 2106 ntBASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C12orf4Q9NQ89 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 AC129492.7-201ENST00000622992 756 ntBASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
C12orf4Q9NQ89 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 AC131274.2-201ENST00000580697 1507 ntBASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 U85056.1-201ENST00000616429 682 ntBASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C12orf4Q9NQ89 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 AC022616.5-201ENST00000518796 181 ntBASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 AL137060.1-201ENST00000618151 2648 ntBASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
C12orf4Q9NQ89 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C12orf4Q9NQ89 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 AC019171.1-201ENST00000601251 1056 ntBASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C12orf4Q9NQ89 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms