Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.53■□□□□ 0.56
Q9N2K0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Q9N2K0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.53■□□□□ 0.56
Q9N2K0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.53■□□□□ 0.56
Q9N2K0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9N2K0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Q9N2K0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9N2K0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.52■□□□□ 0.56
Q9N2K0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9N2K0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9N2K0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9N2K0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Q9N2K0 AC092053.2-201ENST00000640557 1818 ntBASIC18.52■□□□□ 0.56
Q9N2K0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9N2K0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9N2K0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Q9N2K0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.52■□□□□ 0.56
Q9N2K0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.52■□□□□ 0.56
Q9N2K0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.52■□□□□ 0.56
Q9N2K0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.52■□□□□ 0.56
Q9N2K0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9N2K0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.52■□□□□ 0.56
Q9N2K0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Q9N2K0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.52■□□□□ 0.55
Q9N2K0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Q9N2K0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Q9N2K0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.52■□□□□ 0.55
Q9N2K0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Q9N2K0 AC087742.1-201ENST00000575880 1738 ntBASIC18.52■□□□□ 0.55
Q9N2K0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.51■□□□□ 0.55
Q9N2K0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.51■□□□□ 0.55
Q9N2K0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.51■□□□□ 0.55
Q9N2K0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.51■□□□□ 0.55
Q9N2K0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.51■□□□□ 0.55
Q9N2K0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Q9N2K0 MIR6722-201ENST00000617286 78 ntBASIC18.51■□□□□ 0.55
Q9N2K0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.51■□□□□ 0.55
Q9N2K0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Q9N2K0 LINC01529-204ENST00000636474 1715 ntBASIC18.51■□□□□ 0.55
Q9N2K0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Q9N2K0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9N2K0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 AC005703.6-201ENST00000623265 1329 ntBASIC18.5■□□□□ 0.55
Q9N2K0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Q9N2K0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Q9N2K0 AL031848.2-201ENST00000607670 837 ntBASIC18.5■□□□□ 0.55
Q9N2K0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Q9N2K0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 FP325331.1-202ENST00000623531 1380 ntBASIC18.5■□□□□ 0.55
Q9N2K0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.5■□□□□ 0.55
Q9N2K0 AC080038.3-201ENST00000623346 1952 ntBASIC18.5■□□□□ 0.55
Q9N2K0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Q9N2K0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9N2K0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Q9N2K0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9N2K0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Q9N2K0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9N2K0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9N2K0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9N2K0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.49■□□□□ 0.55
Q9N2K0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.49■□□□□ 0.55
Q9N2K0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Q9N2K0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Q9N2K0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9N2K0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.49■□□□□ 0.55
Q9N2K0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Q9N2K0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9N2K0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Q9N2K0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q9N2K0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q9N2K0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q9N2K0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q9N2K0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Q9N2K0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms