Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.09■■□□□ 1.29
CD248Q9HCU0 C17orf82-201ENST00000623772 1530 ntBASIC23.08■■□□□ 1.29
CD248Q9HCU0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.08■■□□□ 1.29
CD248Q9HCU0 AC092171.4-201ENST00000609130 632 ntBASIC23.08■■□□□ 1.29
CD248Q9HCU0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CD248Q9HCU0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CD248Q9HCU0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
CD248Q9HCU0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.28
CD248Q9HCU0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CD248Q9HCU0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CD248Q9HCU0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CD248Q9HCU0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CD248Q9HCU0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CD248Q9HCU0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
CD248Q9HCU0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.07■■□□□ 1.28
CD248Q9HCU0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CD248Q9HCU0 AC091305.1-201ENST00000479476 895 ntBASIC23.07■■□□□ 1.28
CD248Q9HCU0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.07■■□□□ 1.28
CD248Q9HCU0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CD248Q9HCU0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CD248Q9HCU0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CD248Q9HCU0 AC007375.3-201ENST00000600936 2314 ntBASIC23.07■■□□□ 1.28
CD248Q9HCU0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CD248Q9HCU0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.06■■□□□ 1.28
CD248Q9HCU0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.06■■□□□ 1.28
CD248Q9HCU0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CD248Q9HCU0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CD248Q9HCU0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD248Q9HCU0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.06■■□□□ 1.28
CD248Q9HCU0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CD248Q9HCU0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CD248Q9HCU0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.06■■□□□ 1.28
CD248Q9HCU0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.06■■□□□ 1.28
CD248Q9HCU0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CD248Q9HCU0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CD248Q9HCU0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD248Q9HCU0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CD248Q9HCU0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CD248Q9HCU0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CD248Q9HCU0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CD248Q9HCU0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CD248Q9HCU0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.05■■□□□ 1.28
CD248Q9HCU0 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.05■■□□□ 1.28
CD248Q9HCU0 AL138724.1-201ENST00000606771 1088 ntBASIC23.05■■□□□ 1.28
CD248Q9HCU0 AC011298.3-201ENST00000615796 283 ntBASIC23.05■■□□□ 1.28
CD248Q9HCU0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.05■■□□□ 1.28
CD248Q9HCU0 ABCB10P4-201ENST00000566803 2184 ntBASIC23.05■■□□□ 1.28
CD248Q9HCU0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CD248Q9HCU0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.05■■□□□ 1.28
CD248Q9HCU0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CD248Q9HCU0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.04■■□□□ 1.28
CD248Q9HCU0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.04■■□□□ 1.28
CD248Q9HCU0 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.04■■□□□ 1.28
CD248Q9HCU0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CD248Q9HCU0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CD248Q9HCU0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CD248Q9HCU0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CD248Q9HCU0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CD248Q9HCU0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD248Q9HCU0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD248Q9HCU0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD248Q9HCU0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.03■■□□□ 1.28
CD248Q9HCU0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD248Q9HCU0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.03■■□□□ 1.28
CD248Q9HCU0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD248Q9HCU0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CD248Q9HCU0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CD248Q9HCU0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CD248Q9HCU0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CD248Q9HCU0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CD248Q9HCU0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.02■■□□□ 1.28
CD248Q9HCU0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.02■■□□□ 1.28
CD248Q9HCU0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.02■■□□□ 1.28
CD248Q9HCU0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.02■■□□□ 1.28
CD248Q9HCU0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CD248Q9HCU0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CD248Q9HCU0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CD248Q9HCU0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CD248Q9HCU0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CD248Q9HCU0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CD248Q9HCU0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.02■■□□□ 1.28
CD248Q9HCU0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.01■■□□□ 1.27
CD248Q9HCU0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD248Q9HCU0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.01■■□□□ 1.27
CD248Q9HCU0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD248Q9HCU0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CD248Q9HCU0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.01■■□□□ 1.27
CD248Q9HCU0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD248Q9HCU0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD248Q9HCU0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CD248Q9HCU0 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.01■■□□□ 1.27
CD248Q9HCU0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.01■■□□□ 1.27
CD248Q9HCU0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CD248Q9HCU0 RASA4CP-201ENST00000424092 1398 ntBASIC23.01■■□□□ 1.27
CD248Q9HCU0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23■■□□□ 1.27
CD248Q9HCU0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CD248Q9HCU0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23■■□□□ 1.27
CD248Q9HCU0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23■■□□□ 1.27
CD248Q9HCU0 CA15P2-201ENST00000611168 834 ntBASIC23■■□□□ 1.27
CD248Q9HCU0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms