Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.2■□□□□ 0.98
BRF2Q9HAW0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.2■□□□□ 0.98
BRF2Q9HAW0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.2■□□□□ 0.98
BRF2Q9HAW0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
BRF2Q9HAW0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.2■□□□□ 0.98
BRF2Q9HAW0 AC242852.2-201ENST00000615738 1807 ntBASIC21.2■□□□□ 0.98
BRF2Q9HAW0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BRF2Q9HAW0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
BRF2Q9HAW0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.19■□□□□ 0.98
BRF2Q9HAW0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 AC087742.1-201ENST00000575880 1738 ntBASIC21.18■□□□□ 0.98
BRF2Q9HAW0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRF2Q9HAW0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRF2Q9HAW0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
BRF2Q9HAW0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRF2Q9HAW0 LINC00526-201ENST00000581067 1875 ntBASIC21.16■□□□□ 0.98
BRF2Q9HAW0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRF2Q9HAW0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRF2Q9HAW0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.16■□□□□ 0.98
BRF2Q9HAW0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.16■□□□□ 0.98
BRF2Q9HAW0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRF2Q9HAW0 AC241377.3-202ENST00000626088 1088 ntBASIC21.16■□□□□ 0.98
BRF2Q9HAW0 AC241585.3-202ENST00000628937 1088 ntBASIC21.16■□□□□ 0.98
BRF2Q9HAW0 AC245100.8-202ENST00000629247 1058 ntBASIC21.16■□□□□ 0.98
BRF2Q9HAW0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRF2Q9HAW0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRF2Q9HAW0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 AL356740.2-201ENST00000601559 647 ntBASIC21.15■□□□□ 0.98
BRF2Q9HAW0 AL499627.2-201ENST00000606283 725 ntBASIC21.15■□□□□ 0.98
BRF2Q9HAW0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRF2Q9HAW0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BRF2Q9HAW0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
BRF2Q9HAW0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRF2Q9HAW0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 EP400NL-214ENST00000641289 2402 ntBASIC21.13■□□□□ 0.97
BRF2Q9HAW0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 MIR3621-201ENST00000580529 85 ntBASIC21.13■□□□□ 0.97
BRF2Q9HAW0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BRF2Q9HAW0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRF2Q9HAW0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms