Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 IKBKGP1-201ENST00000612193 1073 ntBASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYNDIG1Q9H7V2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 AC142381.3-201ENST00000568208 1670 ntBASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 AC012414.1-201ENST00000556676 535 ntBASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 AL137784.2-201ENST00000607332 1000 ntBASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 AL358852.1-201ENST00000623174 1268 ntBASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SYNDIG1Q9H7V2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 AC138932.3-201ENST00000567634 1902 ntBASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 KRT18P5-201ENST00000436075 1291 ntBASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNDIG1Q9H7V2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNDIG1Q9H7V2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 LINC00543-201ENST00000567234 1845 ntBASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNDIG1Q9H7V2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 MIR572-201ENST00000384983 95 ntBASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 DUX4L2-201ENST00000561772 1275 ntBASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 AC022517.1-201ENST00000592429 346 ntBASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 DUX4L6-201ENST00000626483 1275 ntBASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 DUX4L1-201ENST00000627662 1275 ntBASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 DUX4L8-201ENST00000629013 1275 ntBASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 DUX4L3-201ENST00000630187 1275 ntBASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 DUX4L7-201ENST00000630678 1275 ntBASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 DUX4L5-201ENST00000630834 1275 ntBASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNDIG1Q9H7V2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.52■■□□□ 1.03
SYNDIG1Q9H7V2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
SYNDIG1Q9H7V2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.52■■□□□ 1.03
SYNDIG1Q9H7V2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNDIG1Q9H7V2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.51■■□□□ 1.03
SYNDIG1Q9H7V2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNDIG1Q9H7V2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNDIG1Q9H7V2 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.51■■□□□ 1.03
SYNDIG1Q9H7V2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNDIG1Q9H7V2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNDIG1Q9H7V2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNDIG1Q9H7V2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNDIG1Q9H7V2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYNDIG1Q9H7V2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNDIG1Q9H7V2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNDIG1Q9H7V2 AC027612.3-201ENST00000413684 1047 ntBASIC21.5■■□□□ 1.03
SYNDIG1Q9H7V2 AC090192.1-201ENST00000517740 490 ntBASIC21.5■■□□□ 1.03
SYNDIG1Q9H7V2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms